| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2630 |
|---|
| Symbol | |
|---|
| ID | 5323499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 2730463 |
|---|
| End bp | 2731182 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640791574 |
|---|
| Product | Tol-Pal system TolQ |
|---|
| Protein accession | YP_001328295 |
|---|
| Protein GI | 150397828 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | [TIGR02796] TolQ protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAGG TTGGATTGGC CGCGACGAGC GACGTGACCC TCTGGTCGCT CTTCATGCAA
GCGGGCTTGG TCGTGAAGCT GGTCATGCTG GGGCTCATCG CCGCCTCGGT CTGGACTTGG
GCGATCGTTG TCGACAAGAG CCTGAATTAT GGGCGCGTCC GCCGCCAGCT CGATAGTTTC
GAGCAGGTGT TCTGGTCAGG TCAGTCACTG GAAGAGCTCT ATCGCACGCT CTCGGACCGG
CAGACGAGCG GCATGGGCGC GATCTTCGTT TCGGCCATGC GCGAATGGAA GAAGAGCTTC
GAACGCGGCG CGCGTGCGCC GATCGGCCTG CAGATGCGTA TCGATCGCGC AATGGACGTG
ACGCTCGCCC GTGAGTCCGA GGCGCTCGAA GCGAGGCTCG GTTCGCTGGC GACGATTGGA
TCGGCAGCGC CCTTTATCGG ACTTTTCGGT ACCGTCGTCG GCATCATGAC CTCGTTCCAG
GCGATCGCGG GTTCGAAATC CACCAACCTT GCCGTCGTCG CACCCGGCAT CGCAGAAGCG
CTCTTGGCGA CCGCCATCGG TCTGCTGGCC GCTATCCCCG CCGTTATCGC CTACAACAAA
TTTACCGCCG ATGCCGGCAA GCTGTCGGCG CGCATGGAAG CCTTCGCCGA CGAATTCTCC
GCCATCCTGT CGCGGCAGAT CGACGAGAAG CTGCAGCCTT CTCGCCAGGC CGCGCAGTAA
|
|---|
| Protein sequence | MEQVGLAATS DVTLWSLFMQ AGLVVKLVML GLIAASVWTW AIVVDKSLNY GRVRRQLDSF
EQVFWSGQSL EELYRTLSDR QTSGMGAIFV SAMREWKKSF ERGARAPIGL QMRIDRAMDV
TLARESEALE ARLGSLATIG SAAPFIGLFG TVVGIMTSFQ AIAGSKSTNL AVVAPGIAEA
LLATAIGLLA AIPAVIAYNK FTADAGKLSA RMEAFADEFS AILSRQIDEK LQPSRQAAQ
|
|---|
| |