| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2626 |
|---|
| Symbol | |
|---|
| ID | 5323495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 2726633 |
|---|
| End bp | 2727163 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640791570 |
|---|
| Product | peptidoglycan-associated lipoprotein |
|---|
| Protein accession | YP_001328291 |
|---|
| Protein GI | 150397824 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGAA TTGACGCCCC GGCAGCAAGC CGCATGCAGA CCATCGCCCG CAATCCGATC
ATGATCGCGC TCGTCATGAC GCTTGCCCTC GCTGGTTGCG CTTCCAAGAA GAACCTGCCG
AATGATGCTG CCGGCCTCGG CCTTGGCGCC GGTGCGGCGA CGCCGGGCTC GCAGCAGGAC
TTTACCGTCA ACGTCGGCGA CCGCATCTTC TTCGATACGG ACTCGACTTC GATCCGCGCG
GACGCACAGA CGACGCTCGA CCGTCAGGCC CAGTGGCTGG CGAAATATCC GAACTATGCG
GTCACCATCG AAGGCCATGC GGACGAGCGC GGTACCCGCG AATACAACCT CGCGCTCGGC
GCCCGCCGTG CTGCCGCGAC CCGCGACTAT CTCGTCAGCC GCGGCGTGCC GGGCAACCGT
ATGCGCACGA TCTCCTACGG CAAGGAAAAG CCGGTCGCGG TCTGCGACGA CATCTCCTGC
TGGTCGCAGA ACCGCCGCGC GGTTACCGTT CTCGGCGGCG CCGGAAGCTG A
|
|---|
| Protein sequence | MSRIDAPAAS RMQTIARNPI MIALVMTLAL AGCASKKNLP NDAAGLGLGA GAATPGSQQD
FTVNVGDRIF FDTDSTSIRA DAQTTLDRQA QWLAKYPNYA VTIEGHADER GTREYNLALG
ARRAAATRDY LVSRGVPGNR MRTISYGKEK PVAVCDDISC WSQNRRAVTV LGGAGS
|
|---|
| |