| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2618 |
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| Symbol | |
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| ID | 5323487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2715154 |
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| End bp | 2716749 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791562 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_001328283 |
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| Protein GI | 150397816 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.497758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACCTC GCGTTCTCGT ATCCGATGAA CTCTCTGAAA CCGCCGTCCA GATCTTCCGC
GACCACGGCG TGGAAGTCGA TTTCCAGCCC AAGCTCGGCA AGGACAAGGA GAAGCTCGCC
GAAATCATCG GCAATTACGA CGGCCTTGCC ATTCGCTCGG CCACCAAAGT GACCGAAAAG
CTGATCGCCG CGGCCACCAA TCTCAAGGTC GTCGGCCGCG CCGGTATCGG CGTCGACAAT
GTCGACATTC CCGCGGCTTC TCGCCGCGGC ATCATCGTGA TGAACACGCC GTTCGGCAAT
TCAATCACCA CTGCCGAGCA CGCCATCGCG CTGATGTTTG CCGTTGCCCG GCAGCTTCCC
GCCGCCGACG GTTCGACCCA GGCCGGCAAG TGGGAGAAGT CGAAGTTCAT GGGTGTCGAG
ATCACCGGCA AGGTGCTCGG GGTCATCGGC GCCGGCAATA TAGGCTCGAT CGTCTGTGCC
CGTGCAATCG GGCTCAAGAT GCATGTCATT GCTTACGATC CCTTCCTGTC GAAGGAGCGG
GCCGAGGAAA TGGGCGTGGC CAAGGTCGAG CTCGACGAGC TCCTCGCCCA GGCTGATTTC
ATCAGCCTGC ACGTGCCGCT GACGGACAAG ACCCGCAGCA TCCTGAATGC GGAGGCGATC
GCCAAGGCCA AGCCGGGCGT GCGCATCATC AATTGCGCTC GAGGCGGCCT CGTCGATGAG
AAGGCGCTTG CCGAGGCCAT CAAGTCCGGG CATGTCGCCG GCGCCGGTTT CGACGTATTC
GAAGTGGAGC CCGCCACAGA TAGTCCGCTC TTCGGTCTGC CAAATGTCGT CTGCACGCCG
CATCTCGGCG CCTCGACGAC CGAGGCGCAG GAAAACGTCG CTCTGCAAGT TGCCGAGCAG
ATGTCGGAAT ACCTCGTCAA GGGCGCGGTC ACCAACGCCA TCAACATGCC GTCGATCACG
GCCGAGGAGG CGCCGATGCT CAAGCCCTTC ATCCGGCTTG CGGATGTTCT CGGCGCCTTT
GTCGGGCAGG TCACCGAAAG CGCCATCAAG GAGATCGAGA TACTCTATGA CGGCTCGACC
GCGGCGATGA ACACGAAAGC GCTGACGAGC GCGGCTCTCG CAGGTCTGAT CCGGCCGCAG
GTCGCCGACG TCAACATGGT TTCGGCTCCG GTGATGATCA AGGAAAAGGG TGTCATTCTT
TCCGAGGTCA AGCGCGACAA GACGGGCGTT TTCGACGGCT ACATCAAACT TACGGTGAAG
ACGGCGAACC AGACCCGCTC GGTCGCCGGT ACGGTCTTCT CCGACGGCAA GCCGCGCTTC
ATCCAGATCA AGGGCATCAA TCTCGACGCG GATGTCGGCG CCCACATGGT CTACCTGACC
AATACCGACG TTCCCGGCAT GATCGGCTTC ATCGGCTCCA CACTCGGCGA CGCCGGCGTC
AACATCGCGA ACTTCCAGCT CGGCCGCGAG AAGCAGGGCG GCGATGCGAT CGCGCTGCTT
TACGTCGACG GTCCGGTTTC GGAGACCGTG CTCGACAGGC TGCGCGCAAA CGAAGCGATC
CGCCAGGCGA AGCCGCTGGT GTTCAATATC GACTGA
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| Protein sequence | MAPRVLVSDE LSETAVQIFR DHGVEVDFQP KLGKDKEKLA EIIGNYDGLA IRSATKVTEK
LIAAATNLKV VGRAGIGVDN VDIPAASRRG IIVMNTPFGN SITTAEHAIA LMFAVARQLP
AADGSTQAGK WEKSKFMGVE ITGKVLGVIG AGNIGSIVCA RAIGLKMHVI AYDPFLSKER
AEEMGVAKVE LDELLAQADF ISLHVPLTDK TRSILNAEAI AKAKPGVRII NCARGGLVDE
KALAEAIKSG HVAGAGFDVF EVEPATDSPL FGLPNVVCTP HLGASTTEAQ ENVALQVAEQ
MSEYLVKGAV TNAINMPSIT AEEAPMLKPF IRLADVLGAF VGQVTESAIK EIEILYDGST
AAMNTKALTS AALAGLIRPQ VADVNMVSAP VMIKEKGVIL SEVKRDKTGV FDGYIKLTVK
TANQTRSVAG TVFSDGKPRF IQIKGINLDA DVGAHMVYLT NTDVPGMIGF IGSTLGDAGV
NIANFQLGRE KQGGDAIALL YVDGPVSETV LDRLRANEAI RQAKPLVFNI D
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