Gene Smed_2616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2616 
Symbol 
ID5323485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2712699 
End bp2713997 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content63% 
IMG OID640791560 
Productadenylosuccinate synthetase 
Protein accessionYP_001328281 
Protein GI150397814 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0104] Adenylosuccinate synthase 
TIGRFAM ID[TIGR00184] adenylosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.199466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAATG TCGTGGTGGT CGGATCCCAG TGGGGCGACG AAGGCAAAGG CAAGATCGTG 
GATTGGCTCT CGGAGCGCGC CGATATCGTG GTGCGCTTCC AGGGCGGCCA CAATGCCGGC
CACACGCTGG TGATCGACGG CGTCAGCTAC AAGCTGTCGC TGCTGCCCTC GGGCGTCGTC
CGCTCCGGCA AGCTCGCCGT CATCGGCAAT GGTGTGGTGA TCGACCCCCA TGCACTGATT
GCCGAAATCG ACAGGCTTGC GGCGCAGGGG GTCACTGTTA CGCCCCAAAA CCTGCGCATT
GCCGATAATG CCACGCTCAT TCTTTCGCTC CACCGCGAGC TCGACGGTAT CCGCGAGGAT
GCCGCGTCGA ACAGCGGCAC CAAGATCGGA ACGACGCGCC GTGGCATCGG CCCGGCCTAT
GAGGACAAGG TCGGCCGCCG CGCAATTCGC GTCATGGATC TCGCCGATCT CGACACTCTG
CCGGCCAAGG TCGACCGGCT GCTGACGCAT CACAATGCGC TGCGCCGCGG TCTTGGGGAG
GCGGAAATCA GCCACCGGGC GATCATGGAC GAATTGTCGT CGGTCGCCGC GCGCGTACTG
CCCTTCATGG ATACGATCTG GCTGCTCCTC GACCGGGAGC GTCGCAAGGG TGCCCGGATC
CTCTTCGAAG GGGCACAGGG CACGCTGCTC GACATAGATC ACGGCACTTA TCCTTTCGTG
ACCTCGTCGA ACACGGTCGC AGGTCAGGCT GCTGCGGGCT CGGGCATGGG CCCCGGCTCG
CTCGGCTACA TTCTCGGCAT CACCAAGGCC TACACGACGC GCGTCGGTGA AGGGCCGTTC
CCGACCGAGC TCGACGACGA GGTCGGCCGC TTTCTTGGTG AGCGCGGCCA TGAATTCGGG
ACCGTTACGG GGCGCAAGCG TCGGTGCGGC TGGTTCGATG CTGCTCTGGT GCGCCAGTCG
GTCGCCGCCA ACGGCATCAC GGGCATAGCA CTTACCAAGC TCGACGTGCT CGACGGACTC
GACGAGTTGA AGATTTGCGT CGGTTATACT CTGGATGGAC AGCAGATCGA CCATCTTCCC
GCAAGTCAAG CGCAGCAAGC TCTGGCAAAG CCGGTCTACA TCACGCTCGA AGGATGGAAA
GAATCGACGG TTGGTGCGCG CAGTTGGGCC GAACTTCCGG CGCAGGCGAT CAAATATGTT
CGCCAGGTCG AGGAACTGAT CGGCGCGCCG GTCGCGCTAC TTTCGACCAG CCCGGAACGG
GACGATACGA TACTTGTGAC GGACCCTTTT GAGGACTAG
 
Protein sequence
MTNVVVVGSQ WGDEGKGKIV DWLSERADIV VRFQGGHNAG HTLVIDGVSY KLSLLPSGVV 
RSGKLAVIGN GVVIDPHALI AEIDRLAAQG VTVTPQNLRI ADNATLILSL HRELDGIRED
AASNSGTKIG TTRRGIGPAY EDKVGRRAIR VMDLADLDTL PAKVDRLLTH HNALRRGLGE
AEISHRAIMD ELSSVAARVL PFMDTIWLLL DRERRKGARI LFEGAQGTLL DIDHGTYPFV
TSSNTVAGQA AAGSGMGPGS LGYILGITKA YTTRVGEGPF PTELDDEVGR FLGERGHEFG
TVTGRKRRCG WFDAALVRQS VAANGITGIA LTKLDVLDGL DELKICVGYT LDGQQIDHLP
ASQAQQALAK PVYITLEGWK ESTVGARSWA ELPAQAIKYV RQVEELIGAP VALLSTSPER
DDTILVTDPF ED