| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2608 |
|---|
| Symbol | |
|---|
| ID | 5323477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 2703926 |
|---|
| End bp | 2704588 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640791552 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001328273 |
|---|
| Protein GI | 150397806 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5385] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.577627 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGA ATCCGAATCT GACGTTGACG GGACATGATC TGGCCGCGCT GCTGTGCAGC
CGTGTCTGCC ACGATATCAT CTCGCCGGTC GGCGCCATCA ACAACGGTCT TGAACTCCTC
GACGAGGGCG GTGCCGATGC GGATGCCATG GACCTGATAC GCACCAGTGC GCTCAATGCC
TCGGTGCGAT TGAAGTTTGC GCGCCTGGCA TTCGGTGCGT CCGGCTCCGT CGGGGCGTCG
ATCGACACCG GCGAGGCCGA GAAGGCCGCT AAGGATTTTG CCGCTTCGGA GAAGAAGACC
GAGGTCACCT GGAATGGACC GCGGGCGATC ATCGCAAAAA ACCGCGTCAA GCTGCTCCTC
AACCTTTTCC TGATCGCCTA CGGATCGATC CCGCGCGGCG GCATCATCGA CATCACTCTG
GAAAACCCGG AATTCGACGC GCTGTTTACC CTTTCGGCGA AGGGCCGGAT GATGCGGGTG
CCGCCGAAGC TGGTGGAGCT CATCTCCGGC ACGCCGGAGG AGGCGGTCGA CGCACATTCG
ATCCAGCCCT ATTACACTGT TCTCCTGGCG GAAGAGGCCG GCATGGCTAT CGACGTCGTC
TCGACCGGCG AAGAGATCGT CTTCACAGCG CGCGTCGTCG CGCCGGAGGC GGCGGACGCC
TGA
|
|---|
| Protein sequence | MAKNPNLTLT GHDLAALLCS RVCHDIISPV GAINNGLELL DEGGADADAM DLIRTSALNA
SVRLKFARLA FGASGSVGAS IDTGEAEKAA KDFAASEKKT EVTWNGPRAI IAKNRVKLLL
NLFLIAYGSI PRGGIIDITL ENPEFDALFT LSAKGRMMRV PPKLVELISG TPEEAVDAHS
IQPYYTVLLA EEAGMAIDVV STGEEIVFTA RVVAPEAADA
|
|---|
| |