| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2600 |
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| Symbol | mnmA |
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| ID | 5323469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2697759 |
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| End bp | 2698955 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640791544 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001328265 |
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| Protein GI | 150397798 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAGTC TCGATTTCGA CCGTAAGCCC GAAGATACGC GCGTCGTCGT CGCCATGTCC
GGCGGCGTCG ATTCTTCCGT CGTTGCGGGG TTGCTCAAAC GCGAAGGCTA CGATGTTCTC
GGCATCACGC TGCAGCTTTA CGACCATGGC GCGGCGGTGC ACAGGGCCGG CTCCTGCTGT
GCCGGCCAGG ACATCGACGA CGCGCGACGT GTCTGTGAGA CGATCGGCAT TCCGCATTAC
GTCCTCGATT ACGAGGCGCG ATTTCGCGAA ACGGTGATCA ATCCCTTCGC CGAAAGCTAT
ATAGCGGGCG AGACGCCCAT CCCGTGCGTC GCCTGCAATC AGACGGTCAA ATTCGCCGAT
CTGCTCGCGA CCGCCAAGGA ACTGGGCGCC GATGCGCTCG CCACAGGCCA TTACATCCGC
TCGCGGCCGA GCCCAATGCC GCGCTATCCC GGGCAACGCG CACTCTACAG GCCTGCCGAT
GCCGATCGCG ACCAGAGCTA CTTCCTCTTT GCGACCACTC AGGAGCAGAT CGACTACCTT
CGCTTTCCGC TCGGCGGTCT TCCGAAGAGC GAGACGCGGG CGCTCGCCGA AGAGATGGGC
CTCGTCGTGG CCAAGAAGGC CGACAGCCAG GACATCTGTT TCGTGCCCCA GGGCAAGTAC
AGCGACATCG TGTCGAAGCT CAAGCCGAAT GCGGCGCTGG CCGGCGAGAT CGTCCACCTC
GACGGCCGCG TGCTCGGCGC GCACGAGGGA ATTCTGCACT ACACGATCGG TCAGCGCCGA
GGCATCGGTG TGGCAACCGG CGAACCGCTC TATGTCGTCT ATCTCGATGC ACGCTCGCGC
CGCGTCGTCG TCGGCCCGAA AGAAGCGCTG GAGACCCGCC GCGTCTACCT GCGCGACGTC
AATTGGCTTG GTGACGAAGA GCTGGAGGCG GCGGCGCGTA GCGGCTTCGA ATGTTTCGCC
AAAGTCCGCT CTACCCGCCG TCCGGCTCCG GCGGTTCTCA GCTGCGACGC CGAAGGGCTT
TATGTCGAGC TGGTGGAAGG CGAGGCGGGC GTGGCGCCCG GCCAGGCCTG TGCACTCTAT
TCCGGCATCG GCGAGGACGC ACGCGTCTAT GGCGGCGGCT TCATCCGCAG ATCCGAGCGC
GAGCCGGCCG CGGAAGCGGC GCTGAAGGCA CTTTTGCAGG CCCCCGCGGC GGCCTGA
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| Protein sequence | MNSLDFDRKP EDTRVVVAMS GGVDSSVVAG LLKREGYDVL GITLQLYDHG AAVHRAGSCC
AGQDIDDARR VCETIGIPHY VLDYEARFRE TVINPFAESY IAGETPIPCV ACNQTVKFAD
LLATAKELGA DALATGHYIR SRPSPMPRYP GQRALYRPAD ADRDQSYFLF ATTQEQIDYL
RFPLGGLPKS ETRALAEEMG LVVAKKADSQ DICFVPQGKY SDIVSKLKPN AALAGEIVHL
DGRVLGAHEG ILHYTIGQRR GIGVATGEPL YVVYLDARSR RVVVGPKEAL ETRRVYLRDV
NWLGDEELEA AARSGFECFA KVRSTRRPAP AVLSCDAEGL YVELVEGEAG VAPGQACALY
SGIGEDARVY GGGFIRRSER EPAAEAALKA LLQAPAAA
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