Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2587 |
Symbol | |
ID | 5323455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2688482 |
End bp | 2689807 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640791530 |
Product | nucleoside recognition domain-containing protein |
Protein accession | YP_001328252 |
Protein GI | 150397785 |
COG category | [S] Function unknown |
COG ID | [COG3314] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.577285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.214795 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCACA TCACTACCGA GGCAAAGGGC TCGCGCGGCG GCGCCGCATT GCGGCTCGTG CTCTGCAGCT TCATCGGCAT ATTCCTGTTC TTCGTGCCGG TCGATATCAA CGGCAAATCG ACGATCCTGC TCGACCATGC GGCCACCGCC ATATCGACGC AGGCGCGCCC GGTTGCGATC GGCTTCGTAT TGTTGCTGAT GGCCTATGGC GCCTTCGCAC CCTTCCTGCG CGGTACCTGG CGCAAGACGG TGACCGATGC CGTGTTTTCG GTCCTGCGGG TCCTCGGACT GGCGCTCGCC GTCCTTTATC TCGCAGGCAT CGGGCCCGAG GTCCTCTTCG CACCCGACAT GCTTCCCTTT CTTTTCGACA AGCTGGTGCT CTCGGTCGGG CTGATCGTGC CGATAGGCGC TCTGGCACTC GCGTTTCTGA TCGGCTACGG CCTTCTCGAA TTCACCGGCG TGCTCGTCCA GCCGGTGATG CGGCCGATCT GGCGTACGCC GGGTTGGTCG GCTATCGACG CCGTCGCTTC CTTCGTCGGC AGCTATTCCC TTGCGCTCCT GATCACCGAC CGGGTCTTCC GTGAAGGCAA GTATACGGTA CGCGAAGCCG CGATCATCGC CACGGGCTTT TCCACCGTGT CGGCTACGTT CATGATCATC GTGGCCAAGA CGCTGGGGCT CATGGACGTC TGGAATTTCT ACTTCTGGAC CACGCTTGTC GTCACGTTCA TCGTTTCTGC GATCACGGCC CGGATCTGGC CGCTTGCCGG GCTTGCGCAC GAGGGCGATC GGGACCAGCC GCTGCCCGCC GGCCGCAGCC GCCTGAGGTT CGCCGTCGAG ACCGGCCTCG AACAGGCGGC TACTGCCAAG AGCCTGCCGA CACTCTTGCG AGAAAGCTTC CTTGATGGCC TGCGCATGGC CGCGATGATC CTGCCGAGCA TCATGGCTGT CGGACTCCTC GGGCTTCTTG CCGCAAAATT CACGCCGATC TTCGACATTC TCGGCCTGAC GCTCTATCCC TTCACCTGGA TCGTGCAGTT CGGCGAGCCG ATGCTCGCGG CAAAGGCACT CGCCTCCGGC CTTGCCGAGA TGTTCCTGCC TGCCATACTG CTCAAGGAGG CAGCACCGGA CATGAAGTTC GTGGCGGCCG TGGTGTCTGT CAGCCAGGTC CTGTTTCTGT CGGCCTCCGT TCCCTGCATG CTGGCGACCT CTATCCCGCT CAGCTTCCGC AACCTTCTGG TGATCTGGTA TATTCGCGTC GTATTGAGCA TACTGGTGAC GGCACCGATC GTTTGGATCG GAACATCCAT GGGATGGCTC GGCTGA
|
Protein sequence | MTHITTEAKG SRGGAALRLV LCSFIGIFLF FVPVDINGKS TILLDHAATA ISTQARPVAI GFVLLLMAYG AFAPFLRGTW RKTVTDAVFS VLRVLGLALA VLYLAGIGPE VLFAPDMLPF LFDKLVLSVG LIVPIGALAL AFLIGYGLLE FTGVLVQPVM RPIWRTPGWS AIDAVASFVG SYSLALLITD RVFREGKYTV REAAIIATGF STVSATFMII VAKTLGLMDV WNFYFWTTLV VTFIVSAITA RIWPLAGLAH EGDRDQPLPA GRSRLRFAVE TGLEQAATAK SLPTLLRESF LDGLRMAAMI LPSIMAVGLL GLLAAKFTPI FDILGLTLYP FTWIVQFGEP MLAAKALASG LAEMFLPAIL LKEAAPDMKF VAAVVSVSQV LFLSASVPCM LATSIPLSFR NLLVIWYIRV VLSILVTAPI VWIGTSMGWL G
|
| |