Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2581 |
Symbol | |
ID | 5323449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2681831 |
End bp | 2682574 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640791524 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001328246 |
Protein GI | 150397779 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.544021 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTAT TGGGGCGCAG GAGCGATAGG GCGGTCTTCG ACGACGGACC GGTGCCGCGC TATGAGGCGG TCAAGCAGTT CATCCGGAGC CGCATCGAAA GCGGCGAGTG GCCGCCACAC CATCGCATTC CTTCCGAAAA CGATATCGTC GCCGATCTCG GCGTCAGCCG CATGACCGCC AATCGCGCCC TTCGCGAGTT GGCGAGCGAG GGAGCGATCA CGCGGGTACA GGGGGTGGGA TCGTTTGTCG CTGCCCATAA AGGAAGCACG GCCCTTCTGG AGGTCCGCAA TATTGCCGAC GAGATCCGCG AGCGCGGCCA CAGGCATACC TCGCGGACAG CGCTCATGGA AGAGGAGCAG GCAAGCCCCG AAATCGCGGA GGCGCTCGGG CTTACGACTA AGGCGCGGGT CTTTCACTCG ATCATCGTTC ATGCGGAGAA CGACGTTCCG ATCCAGATCG AAGACCGCTT CGTCAATCCC GCAATCTGCC CCAATTATCT GGAACAGGAT TTTGCCAGCA TGACCCCGAA CGTCTATCTG ACCCTGGTGG CGCCGATCAC GCGCACGGAG CAGATCGTCG AGGCCGTGCA GCCAAAGCCG TGGGAATGCA AGCTTCTTTC GATCAGCCGC GGCGAGCCGT GCCTGATGAT CCGCCGCCGG ACCTGGTCGG AAACCGCGAA TGTGACGGTC GCACGTCTTG TTTATCCGGG CACACGCTAT CGTCTCGAGG GTGTTTCGCA GTAA
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Protein sequence | MAVLGRRSDR AVFDDGPVPR YEAVKQFIRS RIESGEWPPH HRIPSENDIV ADLGVSRMTA NRALRELASE GAITRVQGVG SFVAAHKGST ALLEVRNIAD EIRERGHRHT SRTALMEEEQ ASPEIAEALG LTTKARVFHS IIVHAENDVP IQIEDRFVNP AICPNYLEQD FASMTPNVYL TLVAPITRTE QIVEAVQPKP WECKLLSISR GEPCLMIRRR TWSETANVTV ARLVYPGTRY RLEGVSQ
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