| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2575 |
|---|
| Symbol | |
|---|
| ID | 5323443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 2671821 |
|---|
| End bp | 2672864 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640791518 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_001328240 |
|---|
| Protein GI | 150397773 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1064] Zn-dependent alcohol dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.198407 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.37434 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATTG CACGAGGATA TGCGGCGACG GACGCTTCGA AGCCGCTCGC CCCCTTCACC
TTCGAACGCC GCGAGCCGCG CGACGACGAC GTGGTGATCG ACATCAAATA TTGTGGCGTC
TGCCATTCCG ATATCCACCA GGCGCGTGAC GAATGGGGCA ACTCGACTTT TCCCATGGTT
CCCGGTCACG AAATCGTCGG GCTCGTCAGG GCGGTCGGCT CCAAGGTCAC GAAATTCAAG
ATCGGCGATC GGGTAGGGGT TGGCTGCTTC GTGGATTCCT GCACGACCTG CGCCACGCGC
GATCTCGACC TGGAGCAGTA CTTGCCCGGC CTTGTGGTCA CATATAACGG CGTGGAGGCC
GACGGGACTC CGACGCAGGG AGGTTATTCC GACCATATCG TCGTCAAGGA GGGTTATGTG
CTCTCCATTC CGGAGAACCT GCCGCTCGAT GCAGCCGCAC CGCTGCTTTG CGCCGGCATC
ACGCTCTATT CGCCGCTGCG TCACTGGGAG GCCGGCCCGG GCAAGAAGGT GGCGATCGTC
GGCATGGGCG GCCTCGGCCA CATGGGCGTG AAGCTCGCCC ATGCGATGGG GGCGGAGGTC
ACGGTGCTCA GCCAGACGCT TTCCAAGAAG GAGGATGGGC TCAAGCTCGG GGCCGATCAC
TACTACGCGA CGAAGGATCC GGAGACGTTT ACGAAGCTCG CGGGCAGCTT CGACCTCATC
ATCTGCACGG TCGCGGCCGA GATCGACTGG AACGCCTATC TCAACCTCCT GAAGATCGAC
GGCGATCTGG TGCTGGTCGG CATTCCTGAG AATCCGGTTC CGGTCCATGC CTTCTCGCTC
GTGCCGGCAC GGCGCAGTAT CTCCGGTTCG ATGATCGGCT CGATCAAGGA GACGCAGGAG
ATGCTGGATT TCTGCGGCGA GCACGGCATC GCTTCGGAGA TCGAGATGAT CGAGATCGGG
CAGATCAACG AGGCTTACGA ACGCGTGGTG AGAAGCGACG TACGCTACCG CTTCGTCATC
GACATGGCCT CGCTCAAGGC CTGA
|
|---|
| Protein sequence | MAIARGYAAT DASKPLAPFT FERREPRDDD VVIDIKYCGV CHSDIHQARD EWGNSTFPMV
PGHEIVGLVR AVGSKVTKFK IGDRVGVGCF VDSCTTCATR DLDLEQYLPG LVVTYNGVEA
DGTPTQGGYS DHIVVKEGYV LSIPENLPLD AAAPLLCAGI TLYSPLRHWE AGPGKKVAIV
GMGGLGHMGV KLAHAMGAEV TVLSQTLSKK EDGLKLGADH YYATKDPETF TKLAGSFDLI
ICTVAAEIDW NAYLNLLKID GDLVLVGIPE NPVPVHAFSL VPARRSISGS MIGSIKETQE
MLDFCGEHGI ASEIEMIEIG QINEAYERVV RSDVRYRFVI DMASLKA
|
|---|
| |