Gene Smed_2571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2571 
Symbol 
ID5323439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2667649 
End bp2668797 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content65% 
IMG OID640791514 
Productcobalamin synthesis protein P47K 
Protein accessionYP_001328236 
Protein GI150397769 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0868503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.334928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGGTC CAATGCCGGT GGTGCCGGTC TCGATCCTCA CCGGCTTTCT CGGCGCGGGC 
AAGACGACCC TTCTGAACCG GGTTCTCAAG GATCCGGCGC TTGCAGATAC GGCCGTGATC
ATCAACGAGT TCGGCGACGT CTCGATCGAC CACCTCCTCG TCGAGGCATC AAGTGACGGC
GTCATCGAGC TTTCCGACGG CTGCCTGTGC TGCACCGTTC GCGGTGAGCT TGTCGATACG
CTCGCCGATC TCATGGACCG GATGCAGACG GGCCGTATCA AGCCGTTGAA GCGCGTCGTC
ATCGAAACCA CCGGGCTTGC CGATCCGGCG CCGGTGCTGC AGTCCGTCCT CGGCAATCCC
GTCATTGCCC AGAACTTCCG TCTGGACGGC GTCGTCACCG TCGTCGATGC TGTCAACGGC
GGGCAGACGA TCGCCAATCA TCCGGAGGCG CTGAAGCAGG TCGCCGTTGC CGACCGGCTG
GTGATCAGCA AGACCGGGCT CGCGAAAGGC AGAGGGCTCG GAGGGCTTAA GGCGCGACTG
AGGGATCTCA ACCCGCGCGC GCCCGTCATC GACGGCGATA CGGAGGAGGC GGGCCGGGCC
GAACTCTTCG TCTGCGGCCT CTATGACGCC TCGACCAAGG TCGCCGATGT CGGCCGCTGG
CTCCAGGACG AGGCCGACGC CGATCATGGC CATCACCACC ACCACGGCGC TGGTCACGAC
CATGGGGGCG GGCACCACCA TCACGACCAT CACCACGACG TCAATCGCCA TGGCTCGGAC
ATCCGCTCCT TCAGTATCGT GCACGACCGG CCGATCGAGC CGATGGCGCT GGAGATGTTC
ATCGATCTTC TGCGATCGGC GCATGGCGAA AAGCTTCTCC GCATGAAGGC GATCGTTTCT
GTCGCCGACA ATCCCGAGCG GCCGGTGGTA CTGCACGGCG TGCAGGCGGT CTTTCACGCT
CCGGAGCGGC TTGCCGCCTG GCCTGACCCG GCCGATCGCC GCACGCGGAT GGTGCTGATC
ACCAAAGGCC TGGAGGAAGC GTTCGTGCGT GACCTTTTCG ACGCCTTCAC TGGCAAGCCG
CGCATCGATC GGCCGGACGC ACAGGCGCTC GCCGACAATC CGCTGGCCGT ACCGGGAATG
ACGTTCTGA
 
Protein sequence
MNGPMPVVPV SILTGFLGAG KTTLLNRVLK DPALADTAVI INEFGDVSID HLLVEASSDG 
VIELSDGCLC CTVRGELVDT LADLMDRMQT GRIKPLKRVV IETTGLADPA PVLQSVLGNP
VIAQNFRLDG VVTVVDAVNG GQTIANHPEA LKQVAVADRL VISKTGLAKG RGLGGLKARL
RDLNPRAPVI DGDTEEAGRA ELFVCGLYDA STKVADVGRW LQDEADADHG HHHHHGAGHD
HGGGHHHHDH HHDVNRHGSD IRSFSIVHDR PIEPMALEMF IDLLRSAHGE KLLRMKAIVS
VADNPERPVV LHGVQAVFHA PERLAAWPDP ADRRTRMVLI TKGLEEAFVR DLFDAFTGKP
RIDRPDAQAL ADNPLAVPGM TF