Gene Smed_2568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2568 
Symbol 
ID5323436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2664703 
End bp2665656 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content60% 
IMG OID640791511 
Productacetyl-CoA carboxylase carboxyltransferase subunit alpha 
Protein accessionYP_001328233 
Protein GI150397766 
COG category[I] Lipid transport and metabolism 
COG ID[COG0825] Acetyl-CoA carboxylase alpha subunit 
TIGRFAM ID[TIGR00513] acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.618007 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAATT ATCTCGACTT CGAAAAACCC ATCTCTGATC TCGAAGGCAA GATTCTCGAA 
CTGAAGAAAC TCGCCAGCGA AGACGAGAGC GTCAACACAT CAGACGAGAT TGCCCGATTG
GAAGGGCGCG TCCGCGATGC GATGGTTGAG ATCTATTCCA AGTTGTCCCC CTGGCAGAAG
ACTCAAGTCG CACGCCACCC CTCGCGTCCG CATTTCCTCG ATTATGCGTC ACGCCTCTTC
ACCGAGTTCA CCCCGCTGGC CGGCGACCGG AACTTTGCCA ATGACGATGC AATCCAGGCC
GGGCTCGCCC GATTCCGCGG CGCGCCCGTC GCCGTCATCG GTCAGGAGAA GGGCAACGAC
ACCAAGTCGC GGATCAAGCA CAATTTCGGC AGCCCTCGAC CGGAAGGCTA TCGCAAGGCA
ACACGGATCA TGGAGATGGC CGACCGTTTC GGCCTGCCGC TGATCACGCT GGTCGATACC
GCGGGCGCCT ATCCAGGTGT TAACGCGGAG GAGCGCGGCC AGGCCGAAGC GATCGCGCGC
TCGACCGAAA TGTGCCTCAA CGTCAAGGTG CCGATCGTCA CAGTGGTCAT TGGAGAGGGC
GGCTCAGGCG GCGCAATAGC CATTGCAACA GGCAACCGCG TCTACATGCT GGAACATGCG
ATCTATAGCG TGATCTCACC GGAAGGTGCT GCCTCGATCC TTTGGCGCGA CTCGACGCGA
GCCAAGGAGG CCGCGAGCAA CATGAAGATC ACCGCCGAAG ACTTGAAGTC ACTCGGCGTC
ATCGATGGAA TAATTCCGGA GCCGATCGGC GGGGGCCATC GCGATCCGGA CGCGGTCATC
AGCCGCACCG AAGCCGTGAT CGGCGATGCC CTCAAAGAGC TGTCCGCACG CAGTGGCGAC
GAATTGCGGT CCGACCGGCG GCAGAAATAT CTGAACATCG GCCGTAATCT CTGA
 
Protein sequence
MHNYLDFEKP ISDLEGKILE LKKLASEDES VNTSDEIARL EGRVRDAMVE IYSKLSPWQK 
TQVARHPSRP HFLDYASRLF TEFTPLAGDR NFANDDAIQA GLARFRGAPV AVIGQEKGND
TKSRIKHNFG SPRPEGYRKA TRIMEMADRF GLPLITLVDT AGAYPGVNAE ERGQAEAIAR
STEMCLNVKV PIVTVVIGEG GSGGAIAIAT GNRVYMLEHA IYSVISPEGA ASILWRDSTR
AKEAASNMKI TAEDLKSLGV IDGIIPEPIG GGHRDPDAVI SRTEAVIGDA LKELSARSGD
ELRSDRRQKY LNIGRNL