| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2559 |
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| Symbol | |
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| ID | 5323427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2656021 |
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| End bp | 2657916 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640791502 |
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| Product | cobalt chelatase, pCobT subunit |
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| Protein accession | YP_001328224 |
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| Protein GI | 150397757 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) |
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| TIGRFAM ID | [TIGR01651] cobaltochelatase, CobT subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.921544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.478832 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTTCGA ATTCCAAGGC GAAACCGAAT ACGAGGGAAA ACGCCGCCGA ACCGTTCAAG
CGGGCGCTCT CCGGCTGCGT CAGGTCCATC GCCGGCGATG CGGAGCTTGA GGTCGCTTTT
GCCAATGAGC GGCCGGGAAT GACAGCCGAG CGCATTCGGC TGCCGGAACT CTCCAAACGC
CCGACCCGTC AGGAGCTGGC AGTGGCGCGG GGCCTTGGCG ATTCCATGGC GCTGCGCAAG
GCCTGCCACG ATGCTCGAGT CCATGCGACG ATGTCGCCGC AGGGGGCGGA CGCCCGAGCG
ATCTTCGATG CGGTCGAGCA GGCGCGCGTC GAGGCGATCG GCGCTCTCAG GATGCCGGGT
GTGGCCGACA ATCTCTCCTC CATGCTCCAG GAGAAATACG CCAAGGCGAA TTTCTCGGCA
ATCAATGCCC AGGCGGATGC GCCGCTCGAG GAGGCGGTGG CGCTGCTCGT GCGCGAGAAG
CTGACCGGCG AGAAGCCGCC GGAATCGGCC GGCCAGGTCC TCGACCTCTG GCGTGAGTTC
ATTGAGCAGA AGGCCGGCAG CGACATGCGC AACCTTGCCG GTACGGTCAA CGATCAGCAG
GCTTTTGCCC GCGTCGTGCG CGACATGCTG TCTTCGATGG ACGTTGCCGA GAAATACGGC
GACGACGATA GCGAGCCGGA CGAACAGGAG AGCGAGACCG ACGAGGACCA GCCGCGCAGT
CAGGAGCAGG ACGAAAACGC CAGCGACGAA GAGCAGGGCT CCGATGCCGC CCCTGCCGAG
GAAAACCAGT CTGCCGAGGA GCAGATGGAA GATGGCGAAA TGGACGGCGC GGAAATTTCC
GACGACGACC TTCAGGACGA AGGCGACGAG GACAGCGAAA CGCCGGGCGA GGTCAAGCGG
CCGAACCATC CCTTCGCGGA TTTCAACGAG AAGGTGGATT ATTCCGTCTA TACCCGGGAT
TTCGACGAAA CGATTGCCTC GGAAGAGCTC TGCGACGAGG CGGAGCTCGA CAGGCTGCGC
GCTTTTCTCG ACAAGCAGCT CGCCCATCTG CAGGGTGCAG TGGGGCGCCT CGCCAATCGC
CTGCAGCGCC GCCTGATGGC GCAGCAGAAC CGGTCCTGGG AGTTCGATCT CGAGGAGGGG
TATCTCGACA CGGCCCGGCT GCAGCGCATC ATCATCGATC CTATGCAGCC GCTTTCCTTC
AAGAGGGAGA AGGATACCAA TTTCCGCGAC ACGGTCGTCA CGCTGCTGAT AGACAATTCC
GGCTCCATGC GCGGGCGTCC GATCACGGTA GCAGCCACCT GCGCCGACAT TCTTGCGCGA
ACGCTCGAGC GTTGCGGCGT GAAGGTCGAA ATCCTCGGAT TCACGACAAA GGCCTGGAAG
GGCGGACAGT CGCGCGAGAA ATGGCTTGCC GGCGGCAAGC CCCAGTCGCC GGGCCGCCTC
AACGACCTCA GGCACATCAT CTATAAGTCC GCTGACGCGC CATGGCGCCG CGCACGGCGC
AATCTCGGTC TGATGATGCG CGAGGGACTG CTCAAGGAGA ACATCGACGG CGAGGCGCTG
ATGTGGGCGC ATGACCGGCT CCTGGCACGG TCCGAGCAAA GACGCATTCT CATGATGATC
TCGGATGGCG CGCCGGTCGA CGATTCGACC CTTTCGGTGA ACCCCGGAAA TTACCTCGAA
CGCCATCTGC GCGCCGTTAT CGAGCAGATC GAAACGCGCT CTCCGGTCGA GTTGCTTGCG
ATCGGCATCG GGCACGACGT CACACGCTAT TATCGCCGCG CCGTGACGAT CGTCGATGCG
GACGAACTCG CGGGAGCGAT GACGGAGCAG CTTGCAGCCC TCTTCGAGGA CGAGAGTACG
CGCCGCCGCC CGGGCGGGGC GCGTCGAGCC GGTTAA
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| Protein sequence | MSSNSKAKPN TRENAAEPFK RALSGCVRSI AGDAELEVAF ANERPGMTAE RIRLPELSKR
PTRQELAVAR GLGDSMALRK ACHDARVHAT MSPQGADARA IFDAVEQARV EAIGALRMPG
VADNLSSMLQ EKYAKANFSA INAQADAPLE EAVALLVREK LTGEKPPESA GQVLDLWREF
IEQKAGSDMR NLAGTVNDQQ AFARVVRDML SSMDVAEKYG DDDSEPDEQE SETDEDQPRS
QEQDENASDE EQGSDAAPAE ENQSAEEQME DGEMDGAEIS DDDLQDEGDE DSETPGEVKR
PNHPFADFNE KVDYSVYTRD FDETIASEEL CDEAELDRLR AFLDKQLAHL QGAVGRLANR
LQRRLMAQQN RSWEFDLEEG YLDTARLQRI IIDPMQPLSF KREKDTNFRD TVVTLLIDNS
GSMRGRPITV AATCADILAR TLERCGVKVE ILGFTTKAWK GGQSREKWLA GGKPQSPGRL
NDLRHIIYKS ADAPWRRARR NLGLMMREGL LKENIDGEAL MWAHDRLLAR SEQRRILMMI
SDGAPVDDST LSVNPGNYLE RHLRAVIEQI ETRSPVELLA IGIGHDVTRY YRRAVTIVDA
DELAGAMTEQ LAALFEDEST RRRPGGARRA G
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