Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2546 |
Symbol | |
ID | 5323414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2644593 |
End bp | 2645372 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640791489 |
Product | phospholipid/glycerol acyltransferase |
Protein accession | YP_001328211 |
Protein GI | 150397744 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.845548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATCC TGCGTTCGAT CCTCTTCAAC CTGGCCTTCT ACGCCAACCT GGTCGTGCAG ATGATCGTGC TGACGCCGAT CTATTTCCTC GTGCCGCGCA AAACGGCCTG GTTCGTGCCC AAGAACTGGG CGCGAAGCAA CCATTGGCTC CTAGCGAAGA TCGTCGGAAC GACCTTCGAG GTCGAAGGCC TCGATAACAT TCCCAAAGGC GCCTACATCT TCGCGCCGAA GCATCAGTCC TTCTGGGATG TCTATGCGCT TCTGCCCTGG CTCGACGATC CCTTCTTCAT TCTCAAGCGG GAGCTCACCT GGATACCGCT GTTCGGCTGG TACGTTATGA AGCAGCGCAT GGTTCCGGTG AACCGCGCCG CGCGCGGCAA GGCGATGGCC GCGGTCATGG AGCGCACGAA GCACGAGATG GCAACGGGTC GTCAGCTGAT CATCTATCCT GAAGGAACGC GACGTCCGCC CGGCGCGCCG CCGGAATACA AATATGGCAT AGCCCGGCTC TACCGCGACC TCCAGGTTCC GGTGGTTCCC GTTGCAATGC ATCCGGGGCT GTTCTGGCCC CGCCGCAAGT TCCTGCGTTT CCCCGGCCAC TTCAAGGTGC GGGTCCTTCC GCCGATCGAG GCCGGTCTGG ATCCGGACGC CTTTCTCGCG AAGCTGGTGG AAGTGACGGA GGCGGCGAGC GACGACCTGC TCGTCGAAAC GGTGAACGCC AATCCGCATC TGCCGCTGCC GCCCACTGCC GAACAGCGGC TGCGCGAACT TGCAGCGTGA
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Protein sequence | MIILRSILFN LAFYANLVVQ MIVLTPIYFL VPRKTAWFVP KNWARSNHWL LAKIVGTTFE VEGLDNIPKG AYIFAPKHQS FWDVYALLPW LDDPFFILKR ELTWIPLFGW YVMKQRMVPV NRAARGKAMA AVMERTKHEM ATGRQLIIYP EGTRRPPGAP PEYKYGIARL YRDLQVPVVP VAMHPGLFWP RRKFLRFPGH FKVRVLPPIE AGLDPDAFLA KLVEVTEAAS DDLLVETVNA NPHLPLPPTA EQRLRELAA
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