Gene Smed_2545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2545 
Symbol 
ID5323413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2643761 
End bp2644459 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content62% 
IMG OID640791488 
Producthypothetical protein 
Protein accessionYP_001328210 
Protein GI150397743 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGA GGGGCAAATG GCTGGAGAGG GCCGCGCGCC GTCGCCAGTC CCGCAGCGTG 
CTGCGCAAAC TCCTGCGCCG CAGTTTCTTC GTGCTGCTCG CCTTTCTCGC CGTATTCATT
GCCGGCTTCC TTCAATTCGC CGATACGGTC GCCTCGCTGC AGCCACCTCC CACCCCGAAG
GCGGACGCGA TCGTCGTGCT CACAGGCGGC TTTCAGCGGA TCGACCAGGC GGTCGACCTC
CTGAAACTCG GTGCCGGAAA GCGGCTGTTG ATTTCCGGCG TGCATCCGTC GACGACACGA
AGCCAGATCC GGCGCAACAC CCAGAGCTCG GCCGACCTCT TCAAATGCTG CGTCGATATT
GGCCGTGAAG CGGTCGATAC GATTGGCAAT GCGACCGAGA CCTCGCATTG GATCCGCAGC
CGGGGGTACC GGACCATTCT CGTCGTGACG AATAACTACC ATATGCCGCG CAGTCTGCTC
GAACTGCGCC GCGCCAGGCC GGAAACGGAA TTCGTCGCCT ATCCTGTCGT CAACTCGGAT
CTCAAGACGA CCAACTGGCT CCGCAACCCG CTGGTGCTCA AGGCCATTCT GCTCGAATAC
GTCAAATACT CGGTCTCCTC GCTCCGCGAC GTTATGGGCG CCGGTTGGAC CAATGGACTG
AGGAATGAGC CCTCGCCTGT CAGACTTGGC AAGGAATAG
 
Protein sequence
MAERGKWLER AARRRQSRSV LRKLLRRSFF VLLAFLAVFI AGFLQFADTV ASLQPPPTPK 
ADAIVVLTGG FQRIDQAVDL LKLGAGKRLL ISGVHPSTTR SQIRRNTQSS ADLFKCCVDI
GREAVDTIGN ATETSHWIRS RGYRTILVVT NNYHMPRSLL ELRRARPETE FVAYPVVNSD
LKTTNWLRNP LVLKAILLEY VKYSVSSLRD VMGAGWTNGL RNEPSPVRLG KE