Gene Smed_2535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2535 
Symbol 
ID5323403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2632897 
End bp2633571 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content65% 
IMG OID640791478 
Productredoxin domain-containing protein 
Protein accessionYP_001328200 
Protein GI150397733 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.772759 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGACC AGAAGAAACG CCCTCCAGCC CGGAAATTGT TCGCGATCGC TGCCCTTCTT 
GGGGTGATCG CCGGTGCGGC TGCGGTATAC GTGAAGGAGA CGGGGTCTGG CAATGGCGGC
GACGCGCCGA CGGCCGATGC GAGCTGCCCG CTTGCGGCGC AAAAGGTTGC TTCGCTCACG
CCGCTGATGC GTGGTCAGGT CGCGGCGATG ACTCCGGCGG CCAACGCGCG GCCGATCGGC
GGCCTCGACT TCGCCGGCCC GGACGGCAAG CCGCTGACGC TCGCTGCCTT TGCAGGCAAG
ACCGTTCTCG TCAATCTCTG GGCGACCTGG TGCGTGCCCT GCCGTGAGGA AATGCCGGCG
CTCAACGCCC TGCAACAGGC GCTCGGCGGC GATCGTTTCG AAGTGGTCGC GATCAATATC
GACACCGGTG CCGACGACAA GCCGAAGGCT TTTCTCGACG AGGTCGGCGT TCAAGCACTC
GGCTACTACC GCGACGCCTC GATGGGCGTT TTCAACACGC TCAAGAAGGA GGGGCTCGCC
TTTGGGCTTC CCGCGACCTT GCTGCTCGAC GAAAAGGGTT GCCTGATCGG CTCGATGAAT
GGACCTGCCG CCTGGGACAG CGACGATGCA AAGAAGCTGA TCGAGGCGGC GATGGCTCCG
CCCGCGGCGA GTTGA
 
Protein sequence
MPDQKKRPPA RKLFAIAALL GVIAGAAAVY VKETGSGNGG DAPTADASCP LAAQKVASLT 
PLMRGQVAAM TPAANARPIG GLDFAGPDGK PLTLAAFAGK TVLVNLWATW CVPCREEMPA
LNALQQALGG DRFEVVAINI DTGADDKPKA FLDEVGVQAL GYYRDASMGV FNTLKKEGLA
FGLPATLLLD EKGCLIGSMN GPAAWDSDDA KKLIEAAMAP PAAS