Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2535 |
Symbol | |
ID | 5323403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2632897 |
End bp | 2633571 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640791478 |
Product | redoxin domain-containing protein |
Protein accession | YP_001328200 |
Protein GI | 150397733 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.772759 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGACC AGAAGAAACG CCCTCCAGCC CGGAAATTGT TCGCGATCGC TGCCCTTCTT GGGGTGATCG CCGGTGCGGC TGCGGTATAC GTGAAGGAGA CGGGGTCTGG CAATGGCGGC GACGCGCCGA CGGCCGATGC GAGCTGCCCG CTTGCGGCGC AAAAGGTTGC TTCGCTCACG CCGCTGATGC GTGGTCAGGT CGCGGCGATG ACTCCGGCGG CCAACGCGCG GCCGATCGGC GGCCTCGACT TCGCCGGCCC GGACGGCAAG CCGCTGACGC TCGCTGCCTT TGCAGGCAAG ACCGTTCTCG TCAATCTCTG GGCGACCTGG TGCGTGCCCT GCCGTGAGGA AATGCCGGCG CTCAACGCCC TGCAACAGGC GCTCGGCGGC GATCGTTTCG AAGTGGTCGC GATCAATATC GACACCGGTG CCGACGACAA GCCGAAGGCT TTTCTCGACG AGGTCGGCGT TCAAGCACTC GGCTACTACC GCGACGCCTC GATGGGCGTT TTCAACACGC TCAAGAAGGA GGGGCTCGCC TTTGGGCTTC CCGCGACCTT GCTGCTCGAC GAAAAGGGTT GCCTGATCGG CTCGATGAAT GGACCTGCCG CCTGGGACAG CGACGATGCA AAGAAGCTGA TCGAGGCGGC GATGGCTCCG CCCGCGGCGA GTTGA
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Protein sequence | MPDQKKRPPA RKLFAIAALL GVIAGAAAVY VKETGSGNGG DAPTADASCP LAAQKVASLT PLMRGQVAAM TPAANARPIG GLDFAGPDGK PLTLAAFAGK TVLVNLWATW CVPCREEMPA LNALQQALGG DRFEVVAINI DTGADDKPKA FLDEVGVQAL GYYRDASMGV FNTLKKEGLA FGLPATLLLD EKGCLIGSMN GPAAWDSDDA KKLIEAAMAP PAAS
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