| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2519 |
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| Symbol | |
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| ID | 5323386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2616683 |
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| End bp | 2617882 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640791461 |
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| Product | Bcr/CflA subfamily drug resistance transporter |
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| Protein accession | YP_001328184 |
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| Protein GI | 150397717 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.632928 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCAA AGCCACATGT CTGGCGCTAT TCGCTGCCGG CAGCGCTGCT GCTGATGGCG
CCCTTCGATA TCCTCGCCTC CCTGGCCATG GATATCTATC TCCCCATCGT TCCGGCGATG
CCGGGCATTC TCGGGACCAG CCCCGCCGTG GTGCAGCTCA CGCTGAGCCT CTATGTGGTC
ATGCTCGGCC TCGGCCAGAT CGTCTTCGGG CCTCTCTCCG ATCGCATCGG ACGACGGCCC
GTGCTCATCG GCGGAGCGAT GCTTTTCGCC GCGGCTTCGT TCTGCCTTGC GGCATCATCC
AGCGCCATTC CTTTCGTCGC CTTCCGCTTC CTGCAGGCGA TTGGCGCATC TGCGGCCCTG
GTGGCCACCT TCTCGACTAT TCGGGATGTA TATGGCAATC GCCCTGAAAG CGTGGTCATC
TACAGCCTGT TCAGTTCCAT CCTGGCATTC GTGCCGGCTC TGGGGCCGAT CGCCGGTGCC
GCGCTGGCGG AGAGGTTCGG ATGGCGCTCG ATCTTCGTGA CACTGGGCGC ATTTGCCGTA
ATCGCGCTGC TGCAGGCCTT GCCCCGGTGG CATGAATCTC GCCCTTCGGC GCCCGCGCCG
TCGCGGCACG CATTCGGGCC GCTTCTCCGC AGCCTCGCCT TCTGGACCTA TACTCTCGGC
TTCAGCGCCG CCATGGGCAC CTTCTTCGTG TTCTTTTCCA CCTCACCGCG CGTGCTGATC
GGCAAGGCAG GATATTCGGA GCTTCAGTTC AGCCTCGCCT TTGCCACCGT CGCGGCCGTC
ATGATCTTCA CGGCGCGCTT TGCCAAGCAG TTTGTCTTCC GATGGGGAAC TTCGGGCAGC
CTCCTGCGGG GCATGTGCAT GTTGCTCCTC GGGGCGGCAC TCCTGGCTGC CGGGCAAGGC
CTCGGCACCC CTTCGTCCTG GGTCTTCATC GCGCCCATGT GGGTCATGGC CGTCGGCATC
GTCTTCACGG TGTCGGTAAC CGCGAACGGC GCTCTCAAGG ATTTTGGAGA CATGGCGGGT
TCGGCGGTCG CAGTCTATTT CTGCGTCCAA AGCCTCATCG TCGCGACGGC GGGGACACTG
CTCGTGATCG CACTGCCCGG CGACACCGCA TGGCCGCTTG CGGCCTATGC CTCGATCATG
GCCGGTATCG TGCTGATCGC GCGCCGGCAG CTGCATTCCG GAAGGCAGCC GCAGACATGA
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| Protein sequence | MSSKPHVWRY SLPAALLLMA PFDILASLAM DIYLPIVPAM PGILGTSPAV VQLTLSLYVV
MLGLGQIVFG PLSDRIGRRP VLIGGAMLFA AASFCLAASS SAIPFVAFRF LQAIGASAAL
VATFSTIRDV YGNRPESVVI YSLFSSILAF VPALGPIAGA ALAERFGWRS IFVTLGAFAV
IALLQALPRW HESRPSAPAP SRHAFGPLLR SLAFWTYTLG FSAAMGTFFV FFSTSPRVLI
GKAGYSELQF SLAFATVAAV MIFTARFAKQ FVFRWGTSGS LLRGMCMLLL GAALLAAGQG
LGTPSSWVFI APMWVMAVGI VFTVSVTANG ALKDFGDMAG SAVAVYFCVQ SLIVATAGTL
LVIALPGDTA WPLAAYASIM AGIVLIARRQ LHSGRQPQT
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