Gene Smed_2507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2507 
Symbol 
ID5323374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2605432 
End bp2605860 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content61% 
IMG OID640791449 
Producthypothetical protein 
Protein accessionYP_001328172 
Protein GI150397705 
COG category[S] Function unknown 
COG ID[COG5319] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00622099 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.253692 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCCACT ACACTCTTGC CTGTGACAAG GGCCACGACT TCGAGGGCTG GTTCTCGTCG 
AGCGATGATT TCGACCGGCA AGTCGCGGCG CGCCTGGTCA CGTGTCCCAG CTGCGGTTCG
CTCTCCGTCA ACAAGCAATT GATGGCGCCT GCCGTCTCCA CGGCGCGCAA AAAGGAGGCA
CGCCGCGCGC TGGTGACGGA TCAGGCTCAA AAGGAAACGA TAGCCAGGCT CAAAGAGCTG
GTAAAATCGA TCCGCGAAAA TGCGGAAGAC GTCGGCGAGC GGTTCCCGGA TGAAGCGCGA
AAGATTCATT ACGGGGAGGC CGACCAGCGC GGACTGATCG GCAAGGCCAC CGCAGAAGAG
GCGATCGCTC TTATCGAAGA GGGCATAGAG ATCGCGCCGC TGCCGGTATT GCCCGACGAC
GCGAACTGA
 
Protein sequence
MIHYTLACDK GHDFEGWFSS SDDFDRQVAA RLVTCPSCGS LSVNKQLMAP AVSTARKKEA 
RRALVTDQAQ KETIARLKEL VKSIRENAED VGERFPDEAR KIHYGEADQR GLIGKATAEE
AIALIEEGIE IAPLPVLPDD AN