Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2507 |
Symbol | |
ID | 5323374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2605432 |
End bp | 2605860 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640791449 |
Product | hypothetical protein |
Protein accession | YP_001328172 |
Protein GI | 150397705 |
COG category | [S] Function unknown |
COG ID | [COG5319] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00622099 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.253692 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCCACT ACACTCTTGC CTGTGACAAG GGCCACGACT TCGAGGGCTG GTTCTCGTCG AGCGATGATT TCGACCGGCA AGTCGCGGCG CGCCTGGTCA CGTGTCCCAG CTGCGGTTCG CTCTCCGTCA ACAAGCAATT GATGGCGCCT GCCGTCTCCA CGGCGCGCAA AAAGGAGGCA CGCCGCGCGC TGGTGACGGA TCAGGCTCAA AAGGAAACGA TAGCCAGGCT CAAAGAGCTG GTAAAATCGA TCCGCGAAAA TGCGGAAGAC GTCGGCGAGC GGTTCCCGGA TGAAGCGCGA AAGATTCATT ACGGGGAGGC CGACCAGCGC GGACTGATCG GCAAGGCCAC CGCAGAAGAG GCGATCGCTC TTATCGAAGA GGGCATAGAG ATCGCGCCGC TGCCGGTATT GCCCGACGAC GCGAACTGA
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Protein sequence | MIHYTLACDK GHDFEGWFSS SDDFDRQVAA RLVTCPSCGS LSVNKQLMAP AVSTARKKEA RRALVTDQAQ KETIARLKEL VKSIRENAED VGERFPDEAR KIHYGEADQR GLIGKATAEE AIALIEEGIE IAPLPVLPDD AN
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