| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2499 |
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| Symbol | |
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| ID | 5323366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2592576 |
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| End bp | 2595182 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791441 |
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| Product | ATPase |
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| Protein accession | YP_001328164 |
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| Protein GI | 150397697 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.208993 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATCG AAAAATATTC GGAACGCGTG CGCGGGTTCC TGCAGTCGGC GCAGACCTAT
GCGCTGGCAG AAGGGCACCA GCAGTTCACG CCGGAGCACG TCCTCAAGGT CTTGCTCGAC
GACGACCAGG GCATGGCGGC CTCGCTCATC GAGCGCGCCG GCGGAAATGC GCGCGAGGCG
AAAGTCGGTA CCGCCGCAGC TTTGGCCAAG CTTCCGAAGG TGACCGGCGG CAATGGCTCG
GTCTATCTGT CGCAGCCGCT CGCCAAGGTA TTCACCGCAG CCGAGGACGC CGCAAAGAAG
GCCGGCGACA GCTTCGTCAC GGTCGAGCGC CTGCTTCTGG CATTGGCGAT CGAAAGCTCG
GCGGCGACGG CCTCGATTCT CTCCAAGGCC GGCGTTACGC CGACGAAGCT CAACCAGGTC
ATCAATGAAA TTCGCAAGGG CCGCACCGCC GACAGCGCGA ATGCCGAACA GGGCTTCGAC
TCGCTCAAGA AATATGCCCG CGATCTGACC GCCGAGGCGA GGGAAGGCAA GCTCGATCCG
GTGATCGGCC GTGACGACGA GATCCGCCGC ACGATCCAGG TGCTTTCGCG CCGAACGAAG
AACAATCCTG TTCTGATCGG CGAGCCGGGC GTCGGCAAGA CCGCGATCGC AGAAGGCCTG
GCACTCAGGA TCGTCAACGG CGATGTCCCC GAAAGCCTGA AGGACAAGAG GCTGATGGCG
CTCGACATGG GCGCTTTGAT CGCCGGTGCA AAGTTCCGCG GTGAGTTCGA AGAGCGGCTC
AAGGCCGTGC TGAACGAAGT GCGCTCGGAG GGGGGAGAGA TCATCCTCTT CATCGACGAG
ATGCATACGC TGGTCGGTGC CGGCAAGGCT GAGGGCGCCA TGGATGCATC GAACCTCCTG
AAGCCCGCGC TTGCCCGCGG CGAGCTGCAC TGCGTCGGCG CGACGACTCT CGACGAATAC
CGAAAGCATG TCGAGAAGGA CGCAGCCCTT GCCCGGCGGT TTCAGCCGGT GATGGTCGAG
GAGCCGACGG TCGAAGATAC GATCTCGATC CTGCGCGGCT TGAAGGAGAA ATACGAGCAG
CACCACAAGG TGCGGATCTC CGACTCCGCG CTGGTTGCGG CTGCCGCACT TTCCAACCGC
TACATCACGG ATCGTTTCCT TCCGGACAAG GCTATCGACC TCATGGACGA GGCAGCCTCA
CGTCTGAGGA TGCAGGTCGA CTCCAAACCG GAGGAACTCG ACGAGCTGGA CCGGCGCGTC
ATTCAGCTCA AGATCGAACG CGAAGCCTTG AAGAAGGAGA CCGACGTATC CTCCAGGGAT
CGCCTTTCCA AGCTCGAACT CGACCTGTCC TCGCTCGAAG AACAGGCGGC GGCATTGACG
GCACGCTGGC AGGCGGAGAA GCAGAAGCTC GGCCGGGCGG CAGACCTCAA GAAGCAGCTC
GACGAAGCAC GCAACGAACT GCAGATCGCG CAGCGCAAGG GTGAATTCCA GCGGGCAGGC
GAACTCGCCT ACGGCGTGAT CCCAAACCTC GAAAAGGAAC TTACCGAGGC GGAAAGCCAG
GATGGCGCCA GCGCCAACCC GATGGTGCAG GAGGTCGTGA CCCCAGACAA TATTGCTCAT
ATCGTCTCGC GTTGGACCGG CATTCCGGTC GACAAGATGC TGGAAGGCGA GCGCGACAAG
CTGCTCAGGA TGGAAGACGA GCTGGCTAAA TGGGTCGTCG GTCAGGGCGA CGCCGTGCAG
GCGGTTTCGC GGGCGGTTCG CCGTTCGCGC GCAGGGCTAC AGGATCCGAA CCGGCCGATC
GGCTCGTTTA TTTTCCTAGG CCCGACGGGC GTCGGCAAGA CGGAGCTGAC CAAGGCGCTT
GCCCGGTTCC TCTTCGACGA CGAGACCGCG CTTATGCGGA TCGACATGTC GGAATATATG
GAGAAGCACT CGGTAGCCCG CCTGATCGGC GCGCCTCCCG GCTATGTCGG CTATGAGGAG
GGTGGGGCGC TGACGGAATC CGTTCGTCGC CGGCCCTATC AGGTCGTGCT CTTCGACGAG
ATCGAGAAGG CGCATCCGGA TGTCTTCAAC GTGCTTCTGC AGGTGCTTGA CGATGGACGT
CTGACCGATG GTCAGGGGCG CACCGTCGAC TTCAAGAACA CGATGATCAT CATGACCTCG
AACCTCGGTG CGGAATACCT GACCGCACTC GGTGAAAACG AGGACAGCGA TGCTGTTCGC
GATCAGGTCA TGGAGGTGGT GCGCGCGGCT TTCCGTCCGG AATTCCTGAA TCGCGTCGAC
GAGATCATCC TGTTCCACCG GCTGCGTCGC TCGGAGATGG GCGCGATCGT CGACATACAG
CTTGAAAGGC TGCGCAAGCT CCTGGCGGAT CGCAAGATCA CGCTCGAGCT TGAGGACGAT
GCACGCGTTT TCCTGGCGGA AAGGGGCTAC GATCCTGCTT ACGGCGCACG CCCCCTGAAA
CGGGCGATTC AGAAATATGT CCAGGATCCG CTGGCCGAGA AGGTACTGCA GGGCGAGTTC
CCGGACGGGT CGGTGATCAA AGTCGTTACC GGTTCCGACC GCCTCAACTT CGAGCGCGGA
GCCGGGACGG ACAAAGAAGC CGCGTAA
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| Protein sequence | MDIEKYSERV RGFLQSAQTY ALAEGHQQFT PEHVLKVLLD DDQGMAASLI ERAGGNAREA
KVGTAAALAK LPKVTGGNGS VYLSQPLAKV FTAAEDAAKK AGDSFVTVER LLLALAIESS
AATASILSKA GVTPTKLNQV INEIRKGRTA DSANAEQGFD SLKKYARDLT AEAREGKLDP
VIGRDDEIRR TIQVLSRRTK NNPVLIGEPG VGKTAIAEGL ALRIVNGDVP ESLKDKRLMA
LDMGALIAGA KFRGEFEERL KAVLNEVRSE GGEIILFIDE MHTLVGAGKA EGAMDASNLL
KPALARGELH CVGATTLDEY RKHVEKDAAL ARRFQPVMVE EPTVEDTISI LRGLKEKYEQ
HHKVRISDSA LVAAAALSNR YITDRFLPDK AIDLMDEAAS RLRMQVDSKP EELDELDRRV
IQLKIEREAL KKETDVSSRD RLSKLELDLS SLEEQAAALT ARWQAEKQKL GRAADLKKQL
DEARNELQIA QRKGEFQRAG ELAYGVIPNL EKELTEAESQ DGASANPMVQ EVVTPDNIAH
IVSRWTGIPV DKMLEGERDK LLRMEDELAK WVVGQGDAVQ AVSRAVRRSR AGLQDPNRPI
GSFIFLGPTG VGKTELTKAL ARFLFDDETA LMRIDMSEYM EKHSVARLIG APPGYVGYEE
GGALTESVRR RPYQVVLFDE IEKAHPDVFN VLLQVLDDGR LTDGQGRTVD FKNTMIIMTS
NLGAEYLTAL GENEDSDAVR DQVMEVVRAA FRPEFLNRVD EIILFHRLRR SEMGAIVDIQ
LERLRKLLAD RKITLELEDD ARVFLAERGY DPAYGARPLK RAIQKYVQDP LAEKVLQGEF
PDGSVIKVVT GSDRLNFERG AGTDKEAA
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