| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2498 |
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| Symbol | |
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| ID | 5323365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2590558 |
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| End bp | 2592498 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791440 |
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| Product | peptidase M23B |
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| Protein accession | YP_001328163 |
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| Protein GI | 150397696 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.13296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCG ATAAGAACAT GCTTCGTTCG CTTGGCGACC ACCCGCCGAT CCTTGCGGAC
GGCCGTCGGG CGCCGGATCG GCGCGAGATT TCGCTGCGCT GGCTCTCGGG CACGTTCTTG
ACCGGTATCA CATCGAGCCT TCTTATGGGC GTCGCGCTCT TTGCCGCCCT CGACGGCCGT
CAGCAACTGG CGATCCCGGC GGAAGCCTTC GCCGCGCTCG CCCCCTCCGC GCCCGCTGGC
GCCGCCAAAC GTGGAGACCG CGTCCTTTCA CCCAACATCG TCGCCAAGCC GGCCGACAAG
ACCGTGATGG AAGTCTCGAC AATGATCCAT GACGGCGAAA AAGAGGTGGT GCGCCGTCAG
CCTTTCGTGC ACGTGAAAAT GGCGCTTGCG GCCAACCACC AGACGTCCGA GTCCTATCCC
GACTTCGACC CGCTGGCCAT CTTCTCCACG GATGAGGCGG ACGCCGAGGC GGCGCCGGCA
AAGACCGGCA CGATCTACGG CTCGGACGTC GAGTCCGAGG TTGCGCTGAA GACCGTTGAC
TTTCCGCTCG ATGGCGGCGG CTTCAAAGTC GGACCGTCGA TGTCGCTCGA CGAGGTGGAG
GAGAATGTCC GCACCAACGG TTCGGTGCTG ACCGAGGGCA GCACCCAGGT CGCCTCGCTC
TTCTATGTCG ACCCCCAGCG CTTTGCGTCC GACGCCGACA ATCTCGACCT GATGCAGGGC
CTTGCCGCGC GCGTCGTCGA GGAGAATATG AGCGTCTCCT CCTATGAGAA CATCACCAAG
CAAAGCACCG AATACGCCGA CGACATCATA CCGGTACGCC GCGCACTGCC CATTGCGAAG
GTGATGACCA ATGCCGGCTA TGCCGAAGCC CAGGCCGAGG ACGCAGCCGG CTATCTCGGC
GAAGCGCTCG GCGCCAAGAA TCTTGGCCCC GGCGACGTGC TACGCATTGG CATTATTCAA
AAGGGCGAGG AAGCAAAGAT CGTCCGCGCG ACGATCTATT CGAACAGCCG GCACGTCCTG
ACCATGGCGG TGGACGACCG CGGCCGTTTC GTTCCCGGCG CCGAGCCCCC GAAGCTCGAA
GCGGTAGCCG CTGCCTTCGA CGACACCGGC AGGCCGGTGA TCTCAAGCAG CCACGACCTG
CCTCGGGTTT ATGACGGAAT CTATCGTGCA GCCCTATCCT ACGGAATGAA CGCCGATATG
ATCGCGCTCG TCGTCAAGCT CTTGGCGAGC AACGTCGATT TCCAGGCCCA ACTGAAGCCG
GCGGATTCGC TCGAAGCCTT TTTCTCCGTT ACCGATGAAA GCGGCCGGGC AACGGAAGAT
TCTGAACTGC TCTACGTCAA TGCCAAATTC GGCGACGCCG AGACACGGTT CTATCGCTTC
CAGGATCCGG ACGATAATTC GATCGACTAT TTCGACAAGG ACGGCAAGAG CATCCGCCAG
TTCCTGCTTC GCAACCCCGT TCCGAACGGT CGTTTCCGCT CCGGCTTCGG AATGCGTCGC
CACCCGATTC TCGGCTTCTC ACGCATGCAC ACGGGCGTCG ATTGGTCAGC CCCGCGCGGC
ACGCCGATCA TCGCCGCCGG CAATGGCGTC GTGCAGAAGG CCGGCTGGGA TTCCGGCGGC
TATGGCAACC AGACCCTCAT CCGCCACGCC AACGGCTACG TCTCGTCCTA TAACCACCAA
AGCGCAATTG CCAAAAGCGT CAAGCCGGGG GCAAAGGTGG TCCAGGGCCA GGTGATCGGC
TGGGTCGGCA CGACCGGCCT TTCGACCGGT CCACACCTCC ATTACGAACT GATCGTCAAT
GGCAACAAGG TGGACCCCTT GCGCATTCGG CTGCCGGGCG GCAAATCGCT TGCCGGAGAA
GCCTTGGCGC AATTCGAAAA GGAACGCGAA CGCATCGACG AGCTTCTCGG CGACGATGCG
AACGAAGTCG CAAGCAAGTA G
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| Protein sequence | MSSDKNMLRS LGDHPPILAD GRRAPDRREI SLRWLSGTFL TGITSSLLMG VALFAALDGR
QQLAIPAEAF AALAPSAPAG AAKRGDRVLS PNIVAKPADK TVMEVSTMIH DGEKEVVRRQ
PFVHVKMALA ANHQTSESYP DFDPLAIFST DEADAEAAPA KTGTIYGSDV ESEVALKTVD
FPLDGGGFKV GPSMSLDEVE ENVRTNGSVL TEGSTQVASL FYVDPQRFAS DADNLDLMQG
LAARVVEENM SVSSYENITK QSTEYADDII PVRRALPIAK VMTNAGYAEA QAEDAAGYLG
EALGAKNLGP GDVLRIGIIQ KGEEAKIVRA TIYSNSRHVL TMAVDDRGRF VPGAEPPKLE
AVAAAFDDTG RPVISSSHDL PRVYDGIYRA ALSYGMNADM IALVVKLLAS NVDFQAQLKP
ADSLEAFFSV TDESGRATED SELLYVNAKF GDAETRFYRF QDPDDNSIDY FDKDGKSIRQ
FLLRNPVPNG RFRSGFGMRR HPILGFSRMH TGVDWSAPRG TPIIAAGNGV VQKAGWDSGG
YGNQTLIRHA NGYVSSYNHQ SAIAKSVKPG AKVVQGQVIG WVGTTGLSTG PHLHYELIVN
GNKVDPLRIR LPGGKSLAGE ALAQFEKERE RIDELLGDDA NEVASK
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