Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2493 |
Symbol | |
ID | 5323354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2577300 |
End bp | 2578277 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640791430 |
Product | transport system permease protein |
Protein accession | YP_001328159 |
Protein GI | 150397692 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.357055 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAAGCG TTCTCATCCT ATCGGGCTTT TCGGTCGTCA TACTGTTCTT GGCGCTTGCG ATTGGTGACC ACCATGTCAG CATCGCACAA ATCCTTGCAG TCCTCACCGA CAGCCCGGCG GCGGATGCAC AGTCCATACA GATTATCCGC GATATTCGTC TTCCAAGGGT TATTTTGGGC TTCCTTGTTG GCGCATCGCT TGCCACTGCG GGTATGATTG CCCAGTCGGT GTTGCGAAAT CCATTGGCGG AACCGGGTCT GATCGGTGTC AATGCCGGCG CTGCCCTTGC AGCGGTCATT GTCATCGTCA GGTTCGAGGT GCCTCCCACA CACCTGCTTT CGTGGCTGGC ATTTGCCGGA GCCCTCACAA TGTCCCTCGC GATCTATGCC TTGTCATGGA ACAGCGGCAG TTCTTCGCTG CGCATCATTC TCATCGGCAT CGGCCTCAGT TCGCTAGCCG GGGCCGGCGC AAACTTCATC TCCACCTTCG GAAACCCCCA GGCCGTGCAG CGAGCGATGG TCTGGCTTTC CGGCAGCATC TACAACAGCA CCTGGGATAA AATCCGTACC CTCGCGACAT GGCTCACGAT AGGCATAGCG GGCAGTGCCC TGATCGCGCG GGAAATGGAC CTGCTTATCC TGGGGGACGA GACCGCAAGG GCGCGGGGGC AACCAGTAGA ACTGATCCGA GCCGTCATGT TCGTCCTTTG CGCTGTCCTG TCTGGCGCCG CAGTCGCTGC GGCAGGTCTG GTGGCATTCG TTGGTCTGAT CGCACCGCAC ATTGCTCGCG CGCTCGTAGG GCATTCCCAC GGTCTCATGC TGCCGGTCAC CGCGCTTGCC GGCGGACTTC TGGTGGTCGG AGCCGACCTT GCGGCGCGCA CGTTGTTTAC GCCAGCGCCG CTGCCCGTCG GATTGATGAC GGCTATTCTG GGCGCGCCAT TCTTTGCTTA CCTCATGTGG CGGAAGAAAA ATGCCTGA
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Protein sequence | MRSVLILSGF SVVILFLALA IGDHHVSIAQ ILAVLTDSPA ADAQSIQIIR DIRLPRVILG FLVGASLATA GMIAQSVLRN PLAEPGLIGV NAGAALAAVI VIVRFEVPPT HLLSWLAFAG ALTMSLAIYA LSWNSGSSSL RIILIGIGLS SLAGAGANFI STFGNPQAVQ RAMVWLSGSI YNSTWDKIRT LATWLTIGIA GSALIAREMD LLILGDETAR ARGQPVELIR AVMFVLCAVL SGAAVAAAGL VAFVGLIAPH IARALVGHSH GLMLPVTALA GGLLVVGADL AARTLFTPAP LPVGLMTAIL GAPFFAYLMW RKKNA
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