Gene Smed_2493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2493 
Symbol 
ID5323354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2577300 
End bp2578277 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content60% 
IMG OID640791430 
Producttransport system permease protein 
Protein accessionYP_001328159 
Protein GI150397692 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.357055 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAGCG TTCTCATCCT ATCGGGCTTT TCGGTCGTCA TACTGTTCTT GGCGCTTGCG 
ATTGGTGACC ACCATGTCAG CATCGCACAA ATCCTTGCAG TCCTCACCGA CAGCCCGGCG
GCGGATGCAC AGTCCATACA GATTATCCGC GATATTCGTC TTCCAAGGGT TATTTTGGGC
TTCCTTGTTG GCGCATCGCT TGCCACTGCG GGTATGATTG CCCAGTCGGT GTTGCGAAAT
CCATTGGCGG AACCGGGTCT GATCGGTGTC AATGCCGGCG CTGCCCTTGC AGCGGTCATT
GTCATCGTCA GGTTCGAGGT GCCTCCCACA CACCTGCTTT CGTGGCTGGC ATTTGCCGGA
GCCCTCACAA TGTCCCTCGC GATCTATGCC TTGTCATGGA ACAGCGGCAG TTCTTCGCTG
CGCATCATTC TCATCGGCAT CGGCCTCAGT TCGCTAGCCG GGGCCGGCGC AAACTTCATC
TCCACCTTCG GAAACCCCCA GGCCGTGCAG CGAGCGATGG TCTGGCTTTC CGGCAGCATC
TACAACAGCA CCTGGGATAA AATCCGTACC CTCGCGACAT GGCTCACGAT AGGCATAGCG
GGCAGTGCCC TGATCGCGCG GGAAATGGAC CTGCTTATCC TGGGGGACGA GACCGCAAGG
GCGCGGGGGC AACCAGTAGA ACTGATCCGA GCCGTCATGT TCGTCCTTTG CGCTGTCCTG
TCTGGCGCCG CAGTCGCTGC GGCAGGTCTG GTGGCATTCG TTGGTCTGAT CGCACCGCAC
ATTGCTCGCG CGCTCGTAGG GCATTCCCAC GGTCTCATGC TGCCGGTCAC CGCGCTTGCC
GGCGGACTTC TGGTGGTCGG AGCCGACCTT GCGGCGCGCA CGTTGTTTAC GCCAGCGCCG
CTGCCCGTCG GATTGATGAC GGCTATTCTG GGCGCGCCAT TCTTTGCTTA CCTCATGTGG
CGGAAGAAAA ATGCCTGA
 
Protein sequence
MRSVLILSGF SVVILFLALA IGDHHVSIAQ ILAVLTDSPA ADAQSIQIIR DIRLPRVILG 
FLVGASLATA GMIAQSVLRN PLAEPGLIGV NAGAALAAVI VIVRFEVPPT HLLSWLAFAG
ALTMSLAIYA LSWNSGSSSL RIILIGIGLS SLAGAGANFI STFGNPQAVQ RAMVWLSGSI
YNSTWDKIRT LATWLTIGIA GSALIAREMD LLILGDETAR ARGQPVELIR AVMFVLCAVL
SGAAVAAAGL VAFVGLIAPH IARALVGHSH GLMLPVTALA GGLLVVGADL AARTLFTPAP
LPVGLMTAIL GAPFFAYLMW RKKNA