| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2488 |
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| Symbol | |
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| ID | 5323349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2572435 |
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| End bp | 2574213 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640791426 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001328155 |
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| Protein GI | 150397688 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACA AACTCCAGCG CCGCTTGCGC TCGCAGGACT GGTTCGACAA TCCGGACCAT
ATCGATCTTA CGGCACTCTA TCTCGAGCGC TTCATGAACT ACGGCGTAAC GCCGGAGGAG
TTGCGTTCCG GCAAGCCCGT CATCGGCATT GCCCAGAGCG GCAGCGATCT CACCCCATGC
AATCGGGTCC ACATGGATCT GGCGAAGCGT GTTCGCGACG GCATCCGCGA TGCAGGCGGC
ATTCCGATCG AATTCCCGAC GCACCCGATC TTCGAGAACT GCAAGCGTCC GACCGCCGCC
CTCGACCGCA ACCTCGCCTA TCTGGGCCTG GTGGAAATTC TCTACGGCTA TCCGCTGGAT
GGCGTGGTGC TGACCACCGG CTGCGACAAG ACCACGCCGT CCGCCCTGAT GGCGGCTTCG
ACGGTCGATA TTCCGGCGAT CGTGCTCTCC GGCGGACCCA TGCTCGATGG CTGGCACGAA
GGCGACCTCG TCGGCTCGGG CACGGTGATC TGGCGCATGC GCCGCAAACT GGCGGCAGGC
GAGATCGATC GCGAGGAATT CATGCAGGCC GCGCTCGATT CGGCGCCTTC GGTCGGCCAT
TGCAACACCA TGGGCACGGC TTCGACTATG AACGCCATGG CCGAAGCGCT CGGCATGTCG
CTCACCGGCT GCGGCGCCAT CCCCGCTGCC TATCGCGAGC GTGGGCAGAT GGCCTATCGT
ACCGGACGCC GCGCCGTGGA ACTCGTCATG GAGGACCTGA AGCCCTCCGA CATCCTGACC
CGCGAAGCCT TTCTCAACGC TATCCGAGTC AACTCGGCGA TCGGCGGGTC GACCAATGCC
CAGCCACATC TTGCGGCCAT GGCGAAGCAT GCGGGCGTGG AACTTTATCC GGACGACTGG
CAGGTTCATG GCTTCGATAT CCCGCTGCTC GCCAACATCC AGCCGGCGGG TGCCTATCTC
GGCGAACGCT ACCACCGCGC GGGCGGCACA CCCGCCATCA TGTGGGAACT GCTGCAGGCC
GGAAAGCTCG ACGGTAGCTG TCGCACCGTC ACGGGAAAAT CCATGGCCGA GAACCTCGAG
GGACGCGAAT CGACGGACCG TGAGGTCATC AGGCGCTTTG AGGAGCCGCT CAGGGAAAAG
GCGGGCTTCC TGGTGCTGAA GGGCAATCTC TTCGACTTCG CGATCATGAA GATGAGCGTG
GTCTCAGACG ATTTCAGGAA GCGGTATCTT CAGGAGCCGG GGCGCGAGGG TGTTTTCGAA
GGCAAGGCCG TGGTCTTCGA TGGTTCGGAA GACTATCACA AGCGCATCAA CGACCCCCAA
CTCGACATCG ATGAAGACAC CATCCTGGTG ATCCGCGGTG CGGGGCCGCT CGGCTGGCCG
GGATCGGCGG AAGTCGTGAA CATGCAGCCG CCGGATCACC TCCTGAAGCG TGGCATCAAG
AGCCTGCCCA CCATCGGTGA CGGTCGCCAG TCCGGCACGG CGGACAGCCC CTCCATCCTG
AACGCCTCGC CGGAGAGTGC GGCCGGCGGC GGTCTCGCCT GGTTGCGGAA CGGCGATGTG
ATCCGGATCG ATTTCAACCT GGGCCTTTGC GACATGCTGG TTTCCGACGG CGAGATCGAA
AGGCGAAAGG CGGATGGCAT ACCGGCCGTG CCGTCCGACG CCACGCCCTG GCAGCGTATC
TATCGCAAAT CCGTCACCCA GCTTTCCGAT GGAGCGGTGC TCGAGGGTGC CGCAGACTTC
CGGCAAATCG CCAAAAACAT GCCGCGCCAC AATCACTAG
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| Protein sequence | MADKLQRRLR SQDWFDNPDH IDLTALYLER FMNYGVTPEE LRSGKPVIGI AQSGSDLTPC
NRVHMDLAKR VRDGIRDAGG IPIEFPTHPI FENCKRPTAA LDRNLAYLGL VEILYGYPLD
GVVLTTGCDK TTPSALMAAS TVDIPAIVLS GGPMLDGWHE GDLVGSGTVI WRMRRKLAAG
EIDREEFMQA ALDSAPSVGH CNTMGTASTM NAMAEALGMS LTGCGAIPAA YRERGQMAYR
TGRRAVELVM EDLKPSDILT REAFLNAIRV NSAIGGSTNA QPHLAAMAKH AGVELYPDDW
QVHGFDIPLL ANIQPAGAYL GERYHRAGGT PAIMWELLQA GKLDGSCRTV TGKSMAENLE
GRESTDREVI RRFEEPLREK AGFLVLKGNL FDFAIMKMSV VSDDFRKRYL QEPGREGVFE
GKAVVFDGSE DYHKRINDPQ LDIDEDTILV IRGAGPLGWP GSAEVVNMQP PDHLLKRGIK
SLPTIGDGRQ SGTADSPSIL NASPESAAGG GLAWLRNGDV IRIDFNLGLC DMLVSDGEIE
RRKADGIPAV PSDATPWQRI YRKSVTQLSD GAVLEGAADF RQIAKNMPRH NH
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