Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2481 |
Symbol | |
ID | 5323342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2564962 |
End bp | 2566239 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640791419 |
Product | TRAP dicarboxylate transporter, DctM subunit |
Protein accession | YP_001328148 |
Protein GI | 150397681 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTTG TCGTCTTCAT CGTTTCGCTA CTCGGTGCCA TGGCAATCGG CGTGCCGGTC GCCTTCTCCC TGATGTTCTG CGGCGTCATA CTCATGTGGT ACATGGGTAT GTTCAACACC CAGATCATTG CTCAAAACAT GATCGCGGGT GCCGATACCT TCACGCTCCT CGCCATTCCG TTCTTCATTC TCGCCGGTGA ATTGATGAAC GCGGGCGGGC TTTCGCGCCG CATCATCGAC TTCGCAATCG CCTGTGTCGG TCATATTCGC GGCGGCCTCG GCATCGTTGC CATCATGGCG GCTGTGATCA TGGCGAGCAT CTCCGGTTCG GCGGCAGCCG ACACCGCGGC ACTTGCCGCG ATCCTCATAC CGATGATGGC GAAGGCCGGC TACAACGTCC CCCGATCTGC CGGCCTGATC GCCGCAGGTG GCGTTATCGC CCCCGTCATC CCGCCATCCA TGGCCTTCAT CGTGTTCGGG GTGGCGGCGA ACGTTTCCAT TACCCAGCTC TTCATGGCAG GCATCGTGCC CGGCCTCCTC ATGGGTCTTG CCCTTGTCGC AACCTGGCTG CTGGTCGTGC GGAAGGATGA TATCCAGCCA CTTCCACGTA CGCCTTTGAA AGAGCGTCTC CGCGTCACCG GGCGGGCGCT TTGGGCCCTC GGTATGCCGG TCATCATCCT GGGCGGCATC AAGGCCGGCG TCGTGACGCC GACCGAGGCC GCCGTGGTAG CCGCATTCTA TGCCCTCTTC GTCGGCATGG TCATTTATCG CGAGCTCAAG CCACGTGACC TGCCAGGCGT CATCCTGCAG GCCGCGAAGA CCACCGCTGT CATCATGTTC CTCGTCTGCG CTGCGCTCGT TTCCTCGTGG CTGATAACCG CGGCGAACAT TCCAGCGGAA ATCACCGGAT TCATCTCTCC GCTGATCGAC CGCCCGACGC TTCTGATGTT CGTCATCATG CTGGTCGTAT TGGTTGTTGG CACCGCATTG GACCTTACCC CCACGATCCT GATCCTGACA CCGGTGCTCA TGCCGATTAT CAAGCAGGCT GGAATCGATC CTGTCTATTT CGGCGTTCTA TTCATCATGA ATACCTGCAT AGGGCTGCTG ACCCCGCCTG TCGGCGTCGT TTTGAACGTC GTCAGCGGCG TCGGCCGGGT TCCGCTCGGA AAGGTCATTG TCGGCGTGAC CCCATTCCTG GTCGCCCAGA TACTGGTGCT TTTCCTTCTG GTCCTTTTTC CGGACATCGT CATCGTGCCC GCACGCTGGC TCAACTGA
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Protein sequence | MTLVVFIVSL LGAMAIGVPV AFSLMFCGVI LMWYMGMFNT QIIAQNMIAG ADTFTLLAIP FFILAGELMN AGGLSRRIID FAIACVGHIR GGLGIVAIMA AVIMASISGS AAADTAALAA ILIPMMAKAG YNVPRSAGLI AAGGVIAPVI PPSMAFIVFG VAANVSITQL FMAGIVPGLL MGLALVATWL LVVRKDDIQP LPRTPLKERL RVTGRALWAL GMPVIILGGI KAGVVTPTEA AVVAAFYALF VGMVIYRELK PRDLPGVILQ AAKTTAVIMF LVCAALVSSW LITAANIPAE ITGFISPLID RPTLLMFVIM LVVLVVGTAL DLTPTILILT PVLMPIIKQA GIDPVYFGVL FIMNTCIGLL TPPVGVVLNV VSGVGRVPLG KVIVGVTPFL VAQILVLFLL VLFPDIVIVP ARWLN
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