| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2480 |
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| Symbol | |
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| ID | 5323341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2563919 |
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| End bp | 2564923 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640791418 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_001328147 |
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| Protein GI | 150397680 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAC TGCTACTAGC CACGACTGCC ATCGCTCTCG GTCTTTCGTC CGCAGCGCCG
GCCTTCGCCG AGTTCAACGA ACGCAACATC CGGGTTTCGA ACGGCATCAA CGAAGATCAT
CCCGTCGGCA ACGGCATCAA GGCGATGCAG GCCTGCCTCG ATGAAAAGTC GGGCGGCAAG
CTGAAGCTCA CCGCCTTCTG GGGCGGGGCG CTCGGTGGCG ACCTTCAGGC AACGCAGGCC
CTTCGTTCGG GCGTACAGGA AGCCGTCGTC ACCTCGTCAT CGCCGCTCGT CGGCATCATC
CCGGCACTCG GCGTCTTCGA CCTGCCGTTC CTCTTCGCCA GCGCACAGGA AGCCTATACG
GTGCTCGATG GCGATTTCGG CGACATGATG AACGAGAAGC TGGAGGCGGC CGGTCTGGTC
AACCTCGCCT ATTGGGAAAA CGGCTTCCGC AACCTGTCGA ACTCGGTTCG TCCGGTCACG
AAATGGGAAG ACTTCGAAGG AATGAAGGTT CGCGTAATGC AGAACAACAT CTTCCTCGAC
ACCTTCCAGA ACCTCGGCGC CAACGCCACT CCGATGGCCT TCGGCGAAGT GTTCTCGGCG
CTTGAAACCA AGGCGATCGA CGCTCAGGAA AACCCCTATG TGACGATCGA TACCTCGAAG
TTCTTCGAAG TGCAGAAATA TGTGACCGAG ACGAACCACG CCTACACGCC CTTCCTCTTC
CTGTTCTCGA AGCCGATCTT CGACAGCTAT ACGCCGGAAG AGCAGGCAGC CCTGCGTGAA
TGCGCAATCG TCGGCCGCGA CGAAGAGCGC AAGGTGATCC AGGACCTCAA CAAGAAGTCG
CTGGAAAAGA TCAAGGAAGC CGGGCTTGAA GTGAACGTCC TGTCTGCTGA GGAACAGGCG
CGCATTCGCG AAAAATCAAA GGTCGTCTAT GAGAAACACA AGGCTGCGAT CGGTGCCGAC
GTGGTCGACG CTATTCTCGC CAAGCTGGAA GAGATCCGCA AGTAA
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| Protein sequence | MRKLLLATTA IALGLSSAAP AFAEFNERNI RVSNGINEDH PVGNGIKAMQ ACLDEKSGGK
LKLTAFWGGA LGGDLQATQA LRSGVQEAVV TSSSPLVGII PALGVFDLPF LFASAQEAYT
VLDGDFGDMM NEKLEAAGLV NLAYWENGFR NLSNSVRPVT KWEDFEGMKV RVMQNNIFLD
TFQNLGANAT PMAFGEVFSA LETKAIDAQE NPYVTIDTSK FFEVQKYVTE TNHAYTPFLF
LFSKPIFDSY TPEEQAALRE CAIVGRDEER KVIQDLNKKS LEKIKEAGLE VNVLSAEEQA
RIREKSKVVY EKHKAAIGAD VVDAILAKLE EIRK
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