Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2476 |
Symbol | |
ID | 5323337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2558462 |
End bp | 2559181 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640791414 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001328143 |
Protein GI | 150397676 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTATCTCG AACGCTTCAA GCTTGACGGC GAACTGGCAG TCGTCACCGG AGGAGGGCGC GGCATCGGAC TTGCAAGCGC CGATGCGCTC GGCGAAGCCG GTGCGCGTCT TGCCCTTATC GAGCGCGATC CGGACCTCCT CGAGGAGGCA CGCGCCGTCC TTCAGGACAA GGGCTACGAC GTCTCGGTGC ACGAGGGCGA CGTTACCGAC GCCGCGCGGA TGCAGGCAAT TGCGGACGAA CTGGCGGCGA AAGGCGGCGC CTCCATCCTC GTCAACAATG CCGGCATCGC GCTCAGTGAT ATCCCTGCCG AGAACATGGA GGACGAACGC TGGCTCAAGG TCATCGACGT CAACCTGAAC GGGGTCTACT GGTGCAGCCG TGCTTTCGGC CGGCACATGC TGTCGATGGG CCGAGGCTCC ATCGTCAATG TCGGCTCCAT GTCCGGTTTC ATCGTCAATC GGCCGCAGCC GCAGGCTCAT TACAACGCCT CGAAGGCAGC GGTCCATCAA CTGACCCGCT CGCTCGCCGC TGAATGGGCG TCGCGCGGCG TACGGGTCAA CGCGGTCGCG CCCACCTACA TCGAAACACC GCTCAACGCG CTGGTCGAGA ACGACAGGCC GATGCTCGAC CGCTGGCTCG ATTCAACGCC GATGGCGCGC ATGGGCAAGG ACCACGAGGT CGCAAGCGTG ATCCTCTTCC TGTCCTCTCA GGCGGCATGA
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Protein sequence | MYLERFKLDG ELAVVTGGGR GIGLASADAL GEAGARLALI ERDPDLLEEA RAVLQDKGYD VSVHEGDVTD AARMQAIADE LAAKGGASIL VNNAGIALSD IPAENMEDER WLKVIDVNLN GVYWCSRAFG RHMLSMGRGS IVNVGSMSGF IVNRPQPQAH YNASKAAVHQ LTRSLAAEWA SRGVRVNAVA PTYIETPLNA LVENDRPMLD RWLDSTPMAR MGKDHEVASV ILFLSSQAA
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