Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2474 |
Symbol | |
ID | 5323335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2555800 |
End bp | 2557341 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640791412 |
Product | ABC transporter related |
Protein accession | YP_001328141 |
Protein GI | 150397674 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0599981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCGGT TTTCCGGTGC ATTCTCTGGA ACCCCAATGA CCGAACTTGT CAGCCTATCC GGTATCCGGA AGAATTATGC CGGCGTCCAA GCCCTGAAGG GCGTGGACTT CGATCTGAAG GCCGGCGAAG TGCATGCGCT GATCGGAGAA AATGGCGCGG GCAAATCCAC GCTGATGCGC GTGCTCGGCG GCGAGACGGC ACCGACCTCC GGCACGGTCA GGCTCTACGG CAGGACAGTG CAGTTCTCCG GTCCGCGGGA TGCGACGCGC CGAGGCATTT CGCTGATCCA TCAGGAACTG GCTTTGGCGC CCGATCTGAC GGTTGCCGAG AATATCTTTC TGGGGCGTCT GCCGCGCATC ATCAACCACC GCCGGCTGCG CAAGGCGGCG AGCGAAATCC TCGGCCGTCT CGGCTTCGCG ATCGACCCCG CCATTCAGGC CGGGCGGCTT ACGGTCGCCC ACCAGCAAGT CGTCGAGATC GCCAAGGCGC TTTCCAACAA CGCGCGCATC ATCGTCTTCG ACGAGCCGAC TGCGGTTCTT GCAAACAGCG ATGCCGAGCG GCTGCTTGCC ATCATCCGCG AACTGCGGGC GGGCGGCACC GGCGTGGTCT ACATTTCTCA CCGCCTCAAC GAGGTCTTCG AGCTTTCCGA CCGCATCACG ATCATGAAGG ACGGCGCGCA TGTCGAAACG CGGCAAACTT CCGCCGCCGA TGTCGACGAG GTGATAGCAA GCATGGTCGG ACGCCGTATG TCGACGCTCT TTCCGCCCAG GGACGGCCGC GCGCCGGGCA GGGTAGTCGT AGAGGTTCGC AACATATCGC GCGGTCAGAA AGTCCGCGAC GTCAGTTTCT CGGTCCGCGC GGGGGAAGTC GTCGGTCTCG GCGGACTTGT CTGCTCGGGC CGCACGGAAG TCGCCCGTCT CGTTTTCGGC GCCGACAGAA TGGATGCCGG CACGGTGGAG CTGAACGGCA AGCCGCTCCA CCTTTCCTCT CCGCGCAAGG CCGTTCGGGC GCGCATCGGC CTCGTTCCGG AAGATCGTAA GGAACATGGC GTCATTCTCG ACTCGCCGAT CCGTATCAAC ACGACGCTCG CCAAGATGCG AAGCGTGGCC CGCTTCGGCT TCCTCGACGT GGACAAGGAG CGGCGGGTCG CCGCCTCACT CGGGGCGGAA ATGCACCTCA AGGCGGAAAG CGTCGATGCG GCGGTCTCGA GTCTGTCGGG CGGCAACCAG CAGAAGGTCG CCCTTGCCAA ATGGTTCCAC GCCGATTGCG ACCTGCTCAT TCTTGATGAG CCGACGCGCG GTGTCGATGT GGGAGCGAAA GGCGAAATCT ATACTTTGAT CAACGATCTG GCTAGGGCCG GAAAGGCGGT CCTCGTCATT TCGTCCGAAC ATCAGGAACT GTTCGGATTG TGCGACCGCA TTCTCGTCAT GGCGGAGGGG GCGGTTGCTG GCGAACTCAC CGAAAGCGAG TTCACGGAGC AGCACTTGCT GACGCTGGCG ATGACCGGGT CGACCAGGGA AAGGGATAAC GCAAGCCAAT GA
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Protein sequence | MHRFSGAFSG TPMTELVSLS GIRKNYAGVQ ALKGVDFDLK AGEVHALIGE NGAGKSTLMR VLGGETAPTS GTVRLYGRTV QFSGPRDATR RGISLIHQEL ALAPDLTVAE NIFLGRLPRI INHRRLRKAA SEILGRLGFA IDPAIQAGRL TVAHQQVVEI AKALSNNARI IVFDEPTAVL ANSDAERLLA IIRELRAGGT GVVYISHRLN EVFELSDRIT IMKDGAHVET RQTSAADVDE VIASMVGRRM STLFPPRDGR APGRVVVEVR NISRGQKVRD VSFSVRAGEV VGLGGLVCSG RTEVARLVFG ADRMDAGTVE LNGKPLHLSS PRKAVRARIG LVPEDRKEHG VILDSPIRIN TTLAKMRSVA RFGFLDVDKE RRVAASLGAE MHLKAESVDA AVSSLSGGNQ QKVALAKWFH ADCDLLILDE PTRGVDVGAK GEIYTLINDL ARAGKAVLVI SSEHQELFGL CDRILVMAEG AVAGELTESE FTEQHLLTLA MTGSTRERDN ASQ
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