| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2473 |
|---|
| Symbol | |
|---|
| ID | 5323334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 2554811 |
|---|
| End bp | 2555803 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640791411 |
|---|
| Product | monosaccharide-transporting ATPase |
|---|
| Protein accession | YP_001328140 |
|---|
| Protein GI | 150397673 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.270103 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTA CGTCCGAAAG CGCAGCCGCG CCGTCACCGT TCACGCCCCG TATTCTGGAG
GCGGTCCGCC ACTACGGTAC GCTCGGCATC TTCCTGGTCT TGGTACTGGT CGCCTCGCTC
TGGTCTGATG CATTCCTGAC GGAGCGCAAC CTGATGAACG TGGTGCGCCA GGTCGCCTCC
GGTGCCGGCA TCATGGCCAT CGGAATGCTC TTCGTCGTGC TTACCCGCGG CATAGACCTC
TCGGTGGGTT CCATCGCCGC CGTTGGATCG GTGCTCTGCG CCCATCTCGT GGCAGTACAG
GGCTACGGCG TTCCGATGGC GATCCTGCTC GTGATCGTGA GCGGGGCAGC CTGCGGCGTG
GTCACCGGCT TCTTCGTCGC CTATATGCGG CTGCCGTCTT TTGTCATCTC GCTGGCGATG
ATGGCGATCG CCCGCGGCAT CTCGCTGATC ATCAGTGCGG GTCGCCCCAT CACCATGGGT
TCGCCCGGCG CGCCGCTCGT CGATTTCGGC AGCGGCTTCC TTTTCGGCAT TCCGCAGCCG
GCGATCCTGA TGCTGGCCAT CTATGCCGTG GGGGGCGTGG TGCTGGCCTA TACGAGCTTC
GGCCGCATCG TCACCGCCAT CGGCTCCAAC GAGGAGGCGG TTCGGCTCTC CGGCGTGCCG
GTCGAGCGTT ATGTGTTGTC CGTCTACGTC ATCAGCGGCG CGCTCGCGGC GGTCGCCGGC
ATAGTCGCCG CGGGACGCAC GGGCATAGGC ACGCCGCAGG TCGGTGTCGG CGCGGAACTT
GACGTCATCG CGGCCGTGGT CATCGGCGGG GCCAGCCTCA TGGGCGGGCG CGGCGGCATG
TTCAACACGC TGCTCGGCGC GCTGATCCTC GGCATCATTA CCAACATCAT GAATCTTGCC
GGCGTACCGG GATATCACCA GAACGTCTAT CTCGGCCTGA TCATCATCCT GGCGATGCTC
ATACAGTTCG TCACCGCTCG GTCACGACGT TAG
|
|---|
| Protein sequence | MSTTSESAAA PSPFTPRILE AVRHYGTLGI FLVLVLVASL WSDAFLTERN LMNVVRQVAS
GAGIMAIGML FVVLTRGIDL SVGSIAAVGS VLCAHLVAVQ GYGVPMAILL VIVSGAACGV
VTGFFVAYMR LPSFVISLAM MAIARGISLI ISAGRPITMG SPGAPLVDFG SGFLFGIPQP
AILMLAIYAV GGVVLAYTSF GRIVTAIGSN EEAVRLSGVP VERYVLSVYV ISGALAAVAG
IVAAGRTGIG TPQVGVGAEL DVIAAVVIGG ASLMGGRGGM FNTLLGALIL GIITNIMNLA
GVPGYHQNVY LGLIIILAML IQFVTARSRR
|
|---|
| |