| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2464 |
|---|
| Symbol | |
|---|
| ID | 5323325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 2545667 |
|---|
| End bp | 2546320 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640791402 |
|---|
| Product | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase |
|---|
| Protein accession | YP_001328131 |
|---|
| Protein GI | 150397664 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
|---|
| TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.480967 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCCC CATTCGATCA CGCCGCGAAG CTTGGCATCG TTCCCGTGAT TGCGATCGAG
CGCGCGTCCG ACGCCATCGC TCTGGCTGAC GCGCTTCTCG AAGGCGGGTT GCCGCTGGCA
GAGATTACCT TCCGCACAGT AGCCGCCGCC GAGGTCATTG CGATCATGGC CGAGAAGCGG
CCGGAACTGC TGGTTGGCGC CGGGACGATT CTGACACCCG AAGCACTGGC AGCAGCGATC
GGTGCGGGCG CGCGCTTCGG GCTCGCGCCC GGCTTCGACG CCGAGATCGT CGCGGCCGCG
AAGACCAGGA ATTTTCCCTT TGCCCCCGGC ATCATGACGC CGTCGGACCT GACGGCCGTG
TCGCGTAAAG GCCTCAAGCT TGCAAAGTTC TTTCCCGCAA AGGCGGCCGG CGGCCCGGCC
ATGCTGGAGG CGATAAGTGC GCCTTTCGCC CATCTCGGCA CACGCTTCGT ACCGACGGGC
GGCGTCAGCA TCGACAACAT GCATGAATGG CTGAAGCTCG GCGCGGTGGC CGCCGTCGGC
GGCACCTGGA TCGCGACGAA GGCCGATATA GGCGAAGGCC GCTGGACCGA CATCACGGCA
AAGGCGCGCG CAGCAGTCGC ACGGGCCAGG GACGTACGCG AGGCGAACCG ATGA
|
|---|
| Protein sequence | MNAPFDHAAK LGIVPVIAIE RASDAIALAD ALLEGGLPLA EITFRTVAAA EVIAIMAEKR
PELLVGAGTI LTPEALAAAI GAGARFGLAP GFDAEIVAAA KTRNFPFAPG IMTPSDLTAV
SRKGLKLAKF FPAKAAGGPA MLEAISAPFA HLGTRFVPTG GVSIDNMHEW LKLGAVAAVG
GTWIATKADI GEGRWTDITA KARAAVARAR DVREANR
|
|---|
| |