Gene Smed_2457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2457 
Symbol 
ID5323318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2539447 
End bp2540517 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content67% 
IMG OID640791395 
Productmalate/L-lactate dehydrogenase 
Protein accessionYP_001328124 
Protein GI150397657 
COG category[C] Energy production and conversion 
COG ID[COG2055] Malate/L-lactate dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTTC AGACACTAGT TGCCCCTGAT TTGCTCGAAG CGCGAGTCGA AAACGCATTG 
CGCAATGCCG GTGCGGCGCA GGGTTCCGCC GCCGCGGCGG TCCGGGCGAT GATGCATGCC
TCACTCATCG GGGTAGATAG TCACGGCGTT CGGCTGGTGG TGCATTATGA CCGGGTGCTG
CGGGGCGGCC GGGTCAACGG CACGCCGAAT CTGTCGGTCC GGCGGACGGC GGCAGCCACT
GCGGTCGTGG ACGGGGATAA TGCGCTCGGC CATCATGCGG CATATGTCGC AATGGACAAG
GCGATCGAAC TGGCACGCGA AAGCGGCATA GGTGCGGTCG GCGTCATCCG GTCCTCGCAT
TTCGGCGCAG CCGGCGCTTA CGCGCGGGTC GCGGCCGAGG CGGGCATGAT CGGCTTCGCC
ACCACGAATT CCGACAAGGT CGTGGCACCG TTTCAGGGCC GCGAGCCCTT TCACGGCACC
AACCCGCTGG CCTTCGCCGC GCCGAGCGGC GGTGCGCGGC CCTGGCTGCT CGATATGGCG
ACCTCGTCCA TACCGTTGAA CCGGTTGCTT CTCTGCAAAT CGCTCGGGAT GTCTTTGCCG
GCGGGAGTGG CGGTGGACGA GGCGGGGCAG CCCACGACCG AGCCTTTCGA GGGCAGGACG
CTCCTGCCGC TCGGCGGCGT GGATTTTTCC TTCAAGGGCG CGGCACTTGC CGGCGTGGCG
ACGCTGCTGT CGGCCATTCT GCAGGGCATG ACCCTCGATC ATGCGCTCAT GCCCATGGTC
GGCACCGACG ATTATTCGAC GCCGCGCGAA ATGGGTCATT TCCTGCTTGC CATCGATCCC
GACCGCTTTG GCGGACGCGG CGTCTTCGAC GAGGGCATGT CTGCCTATCT GGAGGCCCTG
CGGAGCGCGC CGGCGCAGGA GGGTTGCGAA GTGCTGGCGC CCGGCGACCG CGAGTGGCGT
GTCGAAGCCG CGCGCAGACA GAACGGCATT CCGATCGATC CCGATACCGC GGCCTTCCTC
GGCCTGTCGC GGAGCCCGGC CGCACCGGCC GGAAATGCCG GGGAGAACTA G
 
Protein sequence
MSLQTLVAPD LLEARVENAL RNAGAAQGSA AAAVRAMMHA SLIGVDSHGV RLVVHYDRVL 
RGGRVNGTPN LSVRRTAAAT AVVDGDNALG HHAAYVAMDK AIELARESGI GAVGVIRSSH
FGAAGAYARV AAEAGMIGFA TTNSDKVVAP FQGREPFHGT NPLAFAAPSG GARPWLLDMA
TSSIPLNRLL LCKSLGMSLP AGVAVDEAGQ PTTEPFEGRT LLPLGGVDFS FKGAALAGVA
TLLSAILQGM TLDHALMPMV GTDDYSTPRE MGHFLLAIDP DRFGGRGVFD EGMSAYLEAL
RSAPAQEGCE VLAPGDREWR VEAARRQNGI PIDPDTAAFL GLSRSPAAPA GNAGEN