| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2456 |
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| Symbol | |
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| ID | 5323317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2538036 |
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| End bp | 2539391 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640791394 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001328123 |
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| Protein GI | 150397656 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.674954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAA TGCTGAAAAA GGGCTTGCTC GCCGCGGCGC TGATGGCCTC GACCGCGCCT
GCGGCCATGG CGCAGGAATG CGCGGATGCG GATCGCGTGC CGATCACCTG GTCGACGATT
GCCGGCTTCT ACACCGATGC GATGGCAGAG CTGGTATCGG GCTTCGAGGC AGGCCATTGC
GTGAAGGTCA ATGTCGTCAA CATAGACAAC TCACAGCTCT ACAACAAGCA GGTCATCGAG
ATGGTCGGCC AGACCGGTGC CTATGATGTC GTGACCCTCG AAACCTCGGA GAAGGCGGAA
TTCGCAGAGA ACGGTTTCAT CCTGCCGATG ACCGAATATT TCGCGGACAA GAAGGCGCAG
CTCGACGACG TCGCGCCGAC GCTCGCTGCT CTGACGACGC AGTACAAGGA TGATGTCTGG
GGTCTGCCTT ATTACACCTA TACGGCCGGA TATATCTATC GTGCCGACCT GTTCGACGAT
CCCACGGAAA AGGAGGCCTT CAAGAAGCGC TTCAACTACG ACCTGGCCGT GCCGACCACC
TGGGCGCAGC ACCGCGATAT CGCCGAGTTC TTCACGCGTA AGGCCGGTGA GACGCTGAAG
GGCGAAAAGC TCACCAAGGA CTTTTACGGC GTCGGCCTGA TGGCCGGTCC TTTCCCGGAA
ATCCAGGACG AGATGTCCGG CGTGCTCTGG TCGCAAGGCG CGGACTGGCT CACCGACGAG
GGCAAGGTGC CGGTCGATGC CGTCGAAAAG GCGATGAACG ACTATCTGGA ACTGGTCAAG
TATGCGCCGC CCGCCGCGCT CACCGTTACC TATGACGGCG TCATGAACCA GATGAAGGAC
GGGCAGATCG CCCAGACCTA TTCCTTCTTC CTCGACCAAT GGCCGAATGC AGTGCAGACC
GAAACCAGCG TGGCCGGCGC CAAGATGGGC GTCGCCGAGG CGCCGGAGAA GAAGGCCTAT
ATCGGCGGCT TCCTGCTGGC GGTTTCCGCA TCCTCCGCCC ACCCGAAGGA GGCGATGGAC
TTCGTCGCCC ACATCGGCGG ACATGATGCG CAGATGGAGT TCGCCAAGGC CGGCGGTACC
TCGACGCTGA TGAGCGTTCT TTCCGATCCG GCCTTTGCCG CGCCGGAAAG CCGCGGGAAG
ACCGGCCACT TTTCAACGCT CCTGGAGATC TTCGACTCGA TGAAGGGTTT CCGCTCGAAC
CTGTTCGATA CGCCGTTCGG CGCGAAGATC TACAACACGA TGCAGATCCC GCTGCAATCG
GCCGCTGCCG GTCAGATTTC GGCGCGCCAG GCCGCCGAAC GGCTTGCCGT CGAAGTCGAG
AAGATTTGCG GCGGCCCGTG CCCGATCGGC AAGTGA
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| Protein sequence | MKSMLKKGLL AAALMASTAP AAMAQECADA DRVPITWSTI AGFYTDAMAE LVSGFEAGHC
VKVNVVNIDN SQLYNKQVIE MVGQTGAYDV VTLETSEKAE FAENGFILPM TEYFADKKAQ
LDDVAPTLAA LTTQYKDDVW GLPYYTYTAG YIYRADLFDD PTEKEAFKKR FNYDLAVPTT
WAQHRDIAEF FTRKAGETLK GEKLTKDFYG VGLMAGPFPE IQDEMSGVLW SQGADWLTDE
GKVPVDAVEK AMNDYLELVK YAPPAALTVT YDGVMNQMKD GQIAQTYSFF LDQWPNAVQT
ETSVAGAKMG VAEAPEKKAY IGGFLLAVSA SSAHPKEAMD FVAHIGGHDA QMEFAKAGGT
STLMSVLSDP AFAAPESRGK TGHFSTLLEI FDSMKGFRSN LFDTPFGAKI YNTMQIPLQS
AAAGQISARQ AAERLAVEVE KICGGPCPIG K
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