| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2448 |
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| Symbol | |
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| ID | 5323309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2530702 |
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| End bp | 2531493 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640791386 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001328115 |
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| Protein GI | 150397648 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.117337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACCA GTTCATCCGC TGACGGGCGG ACCCGCGCGA CCGGCAGTCC CGCCGCCTTC
CTGCGCCCCG GCCTTTTCGA AGGGCGGCAG GTGCTGGTGA GCGGCGGGAC CTCAGGTATC
GGCGCTGCGA TCTGCGAGGC CTTCGCCGCG CTCGGGGCCG ATGTCCTCGC AACGGGCATC
ACCGAGGCGG AGATTGCCGC CGCCGGAAGC CGGCCCGGAC TTCAGGACGT GCAGTTCGCC
ACGCTCGACG TGCGCGACAG GTCTGCCGTG GATGCTCTGG TCGCCGGCCT GCCGCGGCTG
GACCACGTGG TGAACTGCGC CGGCGTGATC CGCCGCAATG ACGAACTCGA GCCGGATGTG
TTCGCCGACG TCGTCGATAT CAATCTCAAC GGCTCCATGC GCGTCTGCGC GGCAGCCCGT
CCACGGCTTG CGGAAACCGG CGGCACGATC GTCAATACCG CCTCCATGCT GTCGTTCTTC
GGCGGTGGCC TGGTGCCCGG CTATTCCGCA TCGAAGGGCG GCATCGCCCA GCTCACCAAA
TCGCTGGCGA TCGCCTATGC GGCCGATGCA ATCCGGGTGA ATGCCATCGC GCCGGGTTGG
ATCGCGACAC CCCTGACGAA GGCGCTACGG GAGAGCCCGG AGCGCAACGC GGCCATTCTC
GGCCGCACGC CGCTCAATCG CTGGGGAGAG CCGGCGGAAG TCGCCGGTGG CGTTCTTTAT
CTGTCCTCGC CGCTTGCAAG CTTCGTTACC GGCAGCGTGC TGGTCATCGA TGGCGGCTAT
CTGATCATGT GA
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| Protein sequence | MSTSSSADGR TRATGSPAAF LRPGLFEGRQ VLVSGGTSGI GAAICEAFAA LGADVLATGI
TEAEIAAAGS RPGLQDVQFA TLDVRDRSAV DALVAGLPRL DHVVNCAGVI RRNDELEPDV
FADVVDINLN GSMRVCAAAR PRLAETGGTI VNTASMLSFF GGGLVPGYSA SKGGIAQLTK
SLAIAYAADA IRVNAIAPGW IATPLTKALR ESPERNAAIL GRTPLNRWGE PAEVAGGVLY
LSSPLASFVT GSVLVIDGGY LIM
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