Gene Smed_2447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2447 
Symbol 
ID5323308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2529698 
End bp2530693 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content65% 
IMG OID640791385 
Productalcohol dehydrogenase 
Protein accessionYP_001328114 
Protein GI150397647 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.767036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCA TTGTTCTCCC CGGACCGCAG GCGCAAATTG ACAACGTGAC ACTGACCGAC 
CTGCCGACCC CGGAGCCCGG GCCGGGCGAA CTGCGAATCA AGGTCATCGC CGTTTCCATC
AATCCCGTGG ACTGGAAGCT GACCTTCGAT CACAAACCGG AATGGACCTA CCCGCATGTG
CTGGGGCTCG ACGCTGCCGG TGTGATCGAT GCGGTCGGCC GGGGCGTCGA GGGCTGGAAA
GCCGGCGACA GGGCGGTCGT TCACAACAAT CTCTGGAAGC CCGGCGTCTT CGCCGAATAT
TGCCTTGCGC CGGCGCACGC GACATCGCGG CTGCCCGGCA GCGTGAACTT CACCGATGCG
GCCGCCATCC CCTGTGCCGG CTATACGGCC TATCAGGCGC TCTTCCGCAA GGCGAGGCTT
GAGGCGGGGC AGACCATACT CATTCAGGGC GCCAATGGCG GTGTCGGCGG ATTTGCCACG
CAACTTGCCC ATCAGGCCGG GGCCACGGTC ATCGCGCTGG CGCGGCCTGA GCATTTCGCC
GCCGTACGCG GGTTCGGTGC CGATATCGTC TTCGATTACC GGGACGCGGA TCTGCTGCAT
AAGGTGCGGG CGGAAACGGA AGGCGGGGAC GGCGTCGATG TCATGCTCGA AGTCGTCAAT
CCCGGCGACG CCCGCAAGTC GCTCGCCTTC CTTCACTATA ACGGGCATCT CGTATCCATC
GACCCGCTGC CGGTCATGAC AGAGGTGCCG TCCTACACCT ATGCCGCCTC GATCCACGAG
GTGGCGCTTG GCGGCGCCTA TCATGCCGGC CACCTGCCGA CCCAGCGCGA TTTCGCCCGT
ATCGGCGATG ACATGATGGC GCGCCTTGCG GCAGGCAAGC TCGATCCGAT GGTCGAGGAG
ATCGTGGCGC TCGGAGACAT ACCGGACGCC CTGCGGCGGC TGCGGCGCCG GGACGTGACG
GGCAAGATCG TCGCCCGCAT TGCTTCGGAT GCCTGA
 
Protein sequence
MKAIVLPGPQ AQIDNVTLTD LPTPEPGPGE LRIKVIAVSI NPVDWKLTFD HKPEWTYPHV 
LGLDAAGVID AVGRGVEGWK AGDRAVVHNN LWKPGVFAEY CLAPAHATSR LPGSVNFTDA
AAIPCAGYTA YQALFRKARL EAGQTILIQG ANGGVGGFAT QLAHQAGATV IALARPEHFA
AVRGFGADIV FDYRDADLLH KVRAETEGGD GVDVMLEVVN PGDARKSLAF LHYNGHLVSI
DPLPVMTEVP SYTYAASIHE VALGGAYHAG HLPTQRDFAR IGDDMMARLA AGKLDPMVEE
IVALGDIPDA LRRLRRRDVT GKIVARIASD A