| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2436 |
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| Symbol | |
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| ID | 5323297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2515634 |
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| End bp | 2517178 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640791374 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001328103 |
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| Protein GI | 150397636 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGC TTCTTCTTGC GGGCACCGCC CTGCTTGCCA TGACCGGTAT CGCAACGGCA
CGCGACATCA CCGTCGCGCA AAGTTCTGAC CTGCGCAGCA ATAATCCGGG CGTCAATCGC
GACGGCAATA CCGATAGCGT CATCCTGCAC ATCGTCGAGG GACTCGTCGG CTACAACAAT
GTCGGCGAAG TGAAGCCGCT GCTCGCCGAG AGCTTCGAGA TGTCTGCCGA TGGGCTGACC
TATACGTTCA AGCTGCGCAG CGACGTGAAA TTTCACAACG GCAAAGCGAT GACGGCCGAC
GACGTGGTGT GGAACTGGAC GCGCTACCTG AAGCCAGAGA CGAAATGGAC CTGCCTGAAA
GATTTCGTGG AAGGCGGGGC CGCGCCTGTG ACAGGCGTCA AGGCAATCGA CGCCTCGACC
GTCGAGATCA CGCTGGCGAA GCCGTCGGCT GTCTTCCTCG GCATGATGTC GCGTCCCGAA
TGCGGCTTCA CCGGCATCAT CTCGAGCGAA TCCCTCGGTG CGGACGGCAG CTTCGTTCAG
CCGATCGGGA CCGGCCCCTT CATGTGGGAC GAATGGAAGA AGGGCGAATA CGTCCATCTC
AAGAAATTTG CCGACTATGT CTCGCCGGAA AACGAAGGAA AGCCGGATGG CATGGTCGGT
TCGAAGCGGC CGCTTGCCGA CGGCGTCAAG TTCATGGTCA TTCCGGACGC TTCGACCGTG
AAGGCAGGTC TGGAATCCGG CGTGCTGGAC ACGGCTGAAA TCTCGCCGGA TCTCATTCCC
GAATTCCAGG CAAGCGAGAC GATGCAACTG ATTGTCGCGC GCAATAACGG CAAGAACCTC
TTTTACATCC AGACTCGGGA CAAGGTCCTG AGCAATCCGG GCGTGCGCCG CGCCATGGCG
ATGGCGCTCG ATCTGGATGA GCTCGTTGCC GCCGCCTCAA ACGGTACGGG TGAGGCGAAC
GGCTCGATGG TGTCGCAGGA TTCGGTCTTT TTCAGCGACA CGCAGAAGAA GCGTCTGCCC
TATGACGTCG AAGCCGCCAA AAAGGAGCTG GCGGATGCCG GCTACAATGG CGAGCCGATC
TCGATCATAG CCAATAAGCG CGGCAACGTG CCGAGCTTCC CGGCTGCGGT CATGGCGCAG
GCCATGATGC AGCAGGCCGG CCTCAACGTT CAGATCGAGG TGCTGGACTA CGCGACGCAG
GTCGACCGCC GTCGGTCCGG CAATTACCAG GTGATTTCCC AGTCGGTGGC GCCGCGTCTC
GACCCGGCCC TCATGTATTC CTTCTATGTC GGCGACAAGG ACAAGAACGC TTCCCTGATG
TGGGACGATC CGAAGGCGAT CGAGCTGATG AACGCAGCCT ATGCCGAGGC TGACCAGGCC
AGACGCCAGA AGATATTCGA TGAGTTTCAC GAGCTCATGC TGAAGGAAAT GCCGGGGATA
TTCCTCTACG ACATGGTCGA TGTCTGGGGC GCGACCAGGA AATTGAAGGG CCAGCCCGTC
TGGCAGTCGA ACGCCCGCCT TTGGGAAGTG TCAGTCGACG ATTGA
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| Protein sequence | MKTLLLAGTA LLAMTGIATA RDITVAQSSD LRSNNPGVNR DGNTDSVILH IVEGLVGYNN
VGEVKPLLAE SFEMSADGLT YTFKLRSDVK FHNGKAMTAD DVVWNWTRYL KPETKWTCLK
DFVEGGAAPV TGVKAIDAST VEITLAKPSA VFLGMMSRPE CGFTGIISSE SLGADGSFVQ
PIGTGPFMWD EWKKGEYVHL KKFADYVSPE NEGKPDGMVG SKRPLADGVK FMVIPDASTV
KAGLESGVLD TAEISPDLIP EFQASETMQL IVARNNGKNL FYIQTRDKVL SNPGVRRAMA
MALDLDELVA AASNGTGEAN GSMVSQDSVF FSDTQKKRLP YDVEAAKKEL ADAGYNGEPI
SIIANKRGNV PSFPAAVMAQ AMMQQAGLNV QIEVLDYATQ VDRRRSGNYQ VISQSVAPRL
DPALMYSFYV GDKDKNASLM WDDPKAIELM NAAYAEADQA RRQKIFDEFH ELMLKEMPGI
FLYDMVDVWG ATRKLKGQPV WQSNARLWEV SVDD
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