| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2435 |
|---|
| Symbol | |
|---|
| ID | 5323296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 2514061 |
|---|
| End bp | 2515506 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640791373 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_001328102 |
|---|
| Protein GI | 150397635 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGGG ATGACGTGAT GTCGATTGCC GCAGCAATCG AATCGATGAA GCCGGATTTC
GTCAGCTTGA GCGACAGCAT CTGGGATTTC GCCGAGCTCA AATTCGATGA GTGGCGTTCG
TCCGGCTTGC TTGCCGCGAG GCTCGAAGAC AATGGCTTCT CCGTTCGGCG CGGCATCGCA
GGCATGGACA CGGCCTTCAT CGGCGAGTGC GGCAGCGGCA AGCCGGTGAT CGCTTTCCTG
GGCGAATTCG ATGCGCTGGC GGGCATGAGC CAGGCAGCCG GGGTCGCCGA GGCGAAGCCG
CTTGTCGACG GGGCAAGCGG CCATGGCTGC GGCCATAACC TGCTGGGCGT CGGTTCCCTG
ATGGCGGCGA TCGCGCTCGC CCGGCATCTG GAGGCCAACA ATCTGCCCGG TACTGTTCGC
TATTACGGCT GCCCGGGCGA GGAGGGCGGT TCGGGCAAGA CCTTCATGGT GCGCGCCGGT
CTGTTCGACG ATGTCGACAC GGCGCTCACC TGGCACCCGG CACCGTTCAA CGGCGTGCGC
TCGACAAACA ACCTTGCGGT TCTCGAATAT TTCTATCGCT TCAAGGGTGT CGCCGCGCAC
GCCTCAAATG CTGCCCATCT CGGTCGTTCG GCGCTCGATG CCGTCGAGCT CATGAATGTC
GGCGTCAACT TTCTGCGCGA GCACATGCCA CAGGATTGCC GTGTGCATTA CGCGATCACC
GATGCAGGCG GCAGGGCGGC GAACGTCGTG CAGGCGAGCG CCGAAGTGCT TTACCTGATC
CGCGCACCGG GAATGCCGGA GGCGCTCAAC CTCGCCAAAC GGGTCGAGAA GGTCGCCCGT
GGTGCAGCCA TGATGACCGA GACCGAAGTG GAAATCGTCT TCGAGACGGC CTCCACCAAC
CTCTTGCCGA ACATCACACT CGAGACGGCC ATGCACGAGA ATATGGTGGC GCTCGGCCCT
GTCGCCTTCG ACACGTCCGA TCTGGCTTTC GCCAGATCCA TTCAGGAGAC CTTCACGGAA
GAGGCAATCA AAAGCAGCAT CCGTCTCTAC CAGATCAAGG GCGACGTATT TTCCAATGCC
GGCGCCGGCG CGTCGACACC ACTGCACCTC GGCCTGCGCG AATTTGAAGG CCATTCGCAC
TTCCGTGCGG GCTCGACCGA TGTCGGCGAT GTCAGCTGGG TTACGCCGAC GGCGCAGTGC
TGGACGCCGG CTTGGGCGAT CGGCACGAAC CCGCATACCT GGCAGGTCGT TGCGCAGGGC
AAGAGCCCCA TCGCCCACAA GGCCATGGCG CATGCCGCCA AGACACTTGC AACGACGGGT
CTGTCACTGG TCACGTCTCC GGAGCTGGTT GCCGCCGCTA AGGCGGAATG GTTGGAGAAG
ACCGGCGGCA AAGCCTATGT CTGTCCCATT CCGGCGGACG TCATGCCGGG GTCTGCGCAT
GCATGA
|
|---|
| Protein sequence | MNRDDVMSIA AAIESMKPDF VSLSDSIWDF AELKFDEWRS SGLLAARLED NGFSVRRGIA
GMDTAFIGEC GSGKPVIAFL GEFDALAGMS QAAGVAEAKP LVDGASGHGC GHNLLGVGSL
MAAIALARHL EANNLPGTVR YYGCPGEEGG SGKTFMVRAG LFDDVDTALT WHPAPFNGVR
STNNLAVLEY FYRFKGVAAH ASNAAHLGRS ALDAVELMNV GVNFLREHMP QDCRVHYAIT
DAGGRAANVV QASAEVLYLI RAPGMPEALN LAKRVEKVAR GAAMMTETEV EIVFETASTN
LLPNITLETA MHENMVALGP VAFDTSDLAF ARSIQETFTE EAIKSSIRLY QIKGDVFSNA
GAGASTPLHL GLREFEGHSH FRAGSTDVGD VSWVTPTAQC WTPAWAIGTN PHTWQVVAQG
KSPIAHKAMA HAAKTLATTG LSLVTSPELV AAAKAEWLEK TGGKAYVCPI PADVMPGSAH
A
|
|---|
| |