Gene Smed_2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2429 
Symbol 
ID5323290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2507225 
End bp2507581 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content59% 
IMG OID640791367 
Producthypothetical protein 
Protein accessionYP_001328096 
Protein GI150397629 
COG category[S] Function unknown 
COG ID[COG5605] Predicted small integral membrane protein 
TIGRFAM ID[TIGR02229] caa(3)-type oxidase, subunit IV 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCACG CGCAGACCCA TGCGCCGCAA CACGCGGCCC ATACGGAGCA CCGGCAGCAC 
CCGATCAAGC TTTACCTCGT GGTCTGGGGC TTGCTCTTCG TCCTCAGTGC CCTCTCCTAT
CTTGTCGATT TCTTCGGCCT TGAAGGCTAT CTTCGCTGGT CGCTGATCCT CATCTTCATG
ATGCTGAAGG CGGGCCTGAT CGTTGCCGTG TTCATGCATA TGGCCTGGGA GCGCCTGGCC
CTGATCTACG CGGTTATTCT GCCGCCGCTT CTGGTGCTCG TCTTCGTGGC TCTGATGGTG
TCGGAATCCA ACTATATCCT CTTCACGCGG CTTACCTTCT TCGGCGGCGG CGAGTAA
 
Protein sequence
MAHAQTHAPQ HAAHTEHRQH PIKLYLVVWG LLFVLSALSY LVDFFGLEGY LRWSLILIFM 
MLKAGLIVAV FMHMAWERLA LIYAVILPPL LVLVFVALMV SESNYILFTR LTFFGGGE