| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2408 |
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| Symbol | |
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| ID | 5323269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2483292 |
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| End bp | 2484329 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640791346 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001328075 |
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| Protein GI | 150397608 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.65462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.048511 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGGAC TTGCCCTTCA AAACGTCGTC AAGGAATTCG GATCGTTCAG GGCCGTCAAC
GATGTCGACC TGACGGTGCC GCACGGAACG TTCGTCTGCA TGCTCGGGCC GTCGGGTTGC
GGCAAGACCA CGCTCCTGCG CATGATTGCC GGTCTCGACC TGCCGACCTC GGGTGCCATA
GGGCTCGACG GCGAGGACAT CACCCGTGTT CCGACGCATA AGCGCAATCT CGGCATGGTC
TTTCAGTCGC TTGCGCTGTT TCCACATCTG ACCGTCGGCG AGAACATTGC CTATCCCCTG
CGCATTCGCG GCGCGCCGAA GGAAGACCAG AGAAAGCGGG TGGACGAACT CCTGTCGATG
ATCCACCTGT CGGGCTATGC CGACCGGCCG GTTTCGAAGC TGTCCGGCGG CCAGCGCCAG
CGTGTGGCAA TTGCCCGGGC GTTGGCTATA TCGCCGAAGC TCTTCCTGCT CGACGAACCG
CTGTCGGCGC TCGATGCCAA GCTGCGCGAA GCGATGCAGG TCGAACTCAG GCAGTTGCAG
CAGAAGCTCG GCATCACCAC CATCGTCGTC ACCCATGACC AGCGTGAGGC GATGACCATG
GCCGACACGG TCGTCGTCAT GAATGGCGGC GAGATCCGGC AGGCCGCCTC GCCGATCGAG
ATCTACCGCC GGCCGGCCGA CAGCTTCGTC GCCGACTTCA TTGGCCAGAC CAATCTGGTC
GAGGCAGAAA CGGACAGGTC CGGCCGTGTG ACGGTGTTCG GTCAGCCGGT TCCAGGTCTC
GACCTGCCCG CCGGCGCGGC GAAGGCAATG CTTTCAATCC GTCCCGAGGA CGTGCACCTG
ACCGCGCCGG GTGCGGGGGC GCTTACCGGC ACGGTGACTT TCGTGCGCGA TCTCGGCGGT
ACGATCGAGA CATTCGTCGA CGTCGCCGGC CGGCAGATCG TCGCCGTCTC CACGCCGCGT
GCGCGGCCGG AGGTCACGGT AGGGCAGCAG GTCGGCATTG GTCTCACGCC TGATGTTTGC
GTGGTGCTCG CCAAATGA
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| Protein sequence | MSGLALQNVV KEFGSFRAVN DVDLTVPHGT FVCMLGPSGC GKTTLLRMIA GLDLPTSGAI
GLDGEDITRV PTHKRNLGMV FQSLALFPHL TVGENIAYPL RIRGAPKEDQ RKRVDELLSM
IHLSGYADRP VSKLSGGQRQ RVAIARALAI SPKLFLLDEP LSALDAKLRE AMQVELRQLQ
QKLGITTIVV THDQREAMTM ADTVVVMNGG EIRQAASPIE IYRRPADSFV ADFIGQTNLV
EAETDRSGRV TVFGQPVPGL DLPAGAAKAM LSIRPEDVHL TAPGAGALTG TVTFVRDLGG
TIETFVDVAG RQIVAVSTPR ARPEVTVGQQ VGIGLTPDVC VVLAK
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