| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2396 |
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| Symbol | |
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| ID | 5323257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2471419 |
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| End bp | 2472804 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640791334 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001328063 |
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| Protein GI | 150397596 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00825655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCAAATG TCGCATCCAC CACCGCAAGC GCCGGCAGCG AACTGACGGC GCGGGCGCTT
CGCGAGGCTG TTTTTGCGGG CCTCATCACG CTTGGACTGT TCGTGCTCTT CGTCGGGCTC
AAGTCCGACC AGAACATCCG CAACGAACTC ATTCTCACCC AGCGCTGGGG ACTGCTTGCG
ATATTCGTGG CGGTTGCCAT GGTTGGCCGT TTCCTCATCG TTGTCTATGT GCAGCCGCGG
TTCGCCAAAC GGAAGGCGGC AAAGGCGGCC GCGCCCGACG TGGTGAAGAA GGACACCTTT
TTCACCCGCC AATGGCCGAA GATCGCGGTC GTCATGCTGC TGCTTTACCC CCCGGTCATC
GTCTCGTTCG TGGGCGTCCA GGGGTCGCTG AAATGGGTCG ACAATTTCGG CATTCAGATC
CTGATCTACG TGATGCTTGC CTGGGGCCTC AACATCGTCG TCGGTCTCGC CGGGTTGCTC
GATCTCGGCT ATGTGGCCTT CTATGCCGTG GGCGCCTATT CCTACGCGCT TCTCTCCAGT
TATTTCGGAC TTTCCTTCTG GGTGCTGCTG CCTGTCGCCG GACTTCTCGC CGCCCTCTGG
GGCATCGTTC TCGGCTTCCC GGTGCTGCGC CTCAGGGGTG ACTATCTGGC GATCGTCACG
CTCGCTTTCG GAGAGATCAT CCGCCTCGTG CTGATCAACT GGACCGAGGT TACCAAGGGG
ACATTCGGCG TCTCCGGCAT CGCCAAGGCG ACGCTTTTCG GCATCAAGTT CGATGCTTCG
AAGGATGGTT TTGCGGCGCT CTTCGACTTG CCTCTCTCTT CGGCCTATTA CAAGATCTTC
CTGTTCTATC TGATCCTCGC GCTCGCCCTT CTGACCGCCT TCGTAACGAT CCGGCTGCGC
CGAATGCCGA TCGGGCGCGC ATGGGAGGCG TTGCGCGAAG ACGAGATCGC CTGCCGTTCG
CTCGGCATCA ACACTGTCAC CACCAAGCTG ACGGCCTTTG CGACGGGTGC GATGTTCGGC
GGGTTTGCAG GCTCCTTTTT TGCCGTGCGT CAGGGCTTCG TCTCGCCGGA ATCCTTCGTC
TTCCTGGAAT CGGCCGTCAT CCTTGCCATC GTCGTTCTTG GCGGCATGGG CTCGCTGACC
GGTATCGCCA TTGCCGCCGT CGTTATGATC GGCGGCACCG AAATCCTGCG TGAGCTGACG
TTCCTCAAGA TGATCTTCGG ACCGGCCTTC ACACCCGAAC TCTATCGCAT GCTGATCTTC
GGCCTGGCCA TGGTGACGGT CATGGTCTGG AAGCCGCGTG GCTTCGTCGG ATCACGAGAG
CCGACCGCGT TCCTGCGCCA ACGCAGGGCA GTCTCCGGCA GCTTCACCAA AGAGGGGCAC
GGCTGA
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| Protein sequence | MANVASTTAS AGSELTARAL REAVFAGLIT LGLFVLFVGL KSDQNIRNEL ILTQRWGLLA
IFVAVAMVGR FLIVVYVQPR FAKRKAAKAA APDVVKKDTF FTRQWPKIAV VMLLLYPPVI
VSFVGVQGSL KWVDNFGIQI LIYVMLAWGL NIVVGLAGLL DLGYVAFYAV GAYSYALLSS
YFGLSFWVLL PVAGLLAALW GIVLGFPVLR LRGDYLAIVT LAFGEIIRLV LINWTEVTKG
TFGVSGIAKA TLFGIKFDAS KDGFAALFDL PLSSAYYKIF LFYLILALAL LTAFVTIRLR
RMPIGRAWEA LREDEIACRS LGINTVTTKL TAFATGAMFG GFAGSFFAVR QGFVSPESFV
FLESAVILAI VVLGGMGSLT GIAIAAVVMI GGTEILRELT FLKMIFGPAF TPELYRMLIF
GLAMVTVMVW KPRGFVGSRE PTAFLRQRRA VSGSFTKEGH G
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