Gene Smed_2385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2385 
Symbol 
ID5323246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2463570 
End bp2463992 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content62% 
IMG OID640791323 
Producthypothetical protein 
Protein accessionYP_001328052 
Protein GI150397585 
COG category[S] Function unknown 
COG ID[COG3755] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.953868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.33796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGG CTGCGCCTGC TCTCGGCCTG GCGTTATGCT GCACGGCTTT TGCCTCGGCT 
CAGCAGCAGC CTGAGCCGGA TTGCCGGAAA GCGGTGACGC AGACGGATCT CAACATTTGC
GCCGATAAGG ACCATCGGAT GGCGGATGCG GAACTGAACA CGACCTACCG CCTTGCGGTG
GCGGCCATGC AGGCGACCGA CAAGGAGCTT GGCGAAATCG ACGCGGCCTA TGTCGGAGCG
CTGGAGGCCC TGAAAAAGGC CCAGCGTGCC TGGATCGGCT ATCGCGACGG ACAATGCGAA
CTCGCAGGCT TCGAGGCGAG AGGCGGCTCG ATGGAACCCA TGCTGGTTTC CGGCTGCCTC
GCAGAGCTGA CACGCAAGCG CACTGACGAG CTCAGGAAGA TCGTTGAATC GGCGGAGAAT
TGA
 
Protein sequence
MKAAAPALGL ALCCTAFASA QQQPEPDCRK AVTQTDLNIC ADKDHRMADA ELNTTYRLAV 
AAMQATDKEL GEIDAAYVGA LEALKKAQRA WIGYRDGQCE LAGFEARGGS MEPMLVSGCL
AELTRKRTDE LRKIVESAEN