Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2381 |
Symbol | |
ID | 5323242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2459780 |
End bp | 2460319 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640791319 |
Product | peroxiredoxin |
Protein accession | YP_001328048 |
Protein GI | 150397581 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0678] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.535734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.175028 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGGCA GAAAAGTTCC CGCTGTAACC TTCCGCACCC GCGTCCGCGA CGAGTCCGTC GGCGGTTCCA ACCCGTTCCG CTGGCAGGAC GTTACCTCGG ACGACTATTT TGCCGGCAAG CGCGTCGTGC TGTTTTCGCT CCCGGGTGCT TTCACACCGA CCTGCTCGAC CTACCAGCTG CCGGACTTCG AAAAGCTTAA CTCCGAATTC CGGGCTCTCG GGATCGAGGA GATCTACTGC GTCTCCGTCA ACGACGCTTT CGTCATGAAC GCCTGGGGCA AATCGCAGGG CCTCGAGAAC GTCAAGCTCA TTCCGGACGG TTCGGGCGAG TTCACCCGCA AAATGGGCAT GCTCGTCGCC AAGGATAATC TCGGCTTCGG CATGCGCTCC TGGCGCTACG CCGCTATCGT TAACAATGGC GTTGTCGAGC AGTGGTTCGA AGAGGAAGGC TACTCCGACA ATTGCGACAG CGATCCCTAC GGCGTCTCCT CGCCGCAGAA CATCCTGGCG GCGCTGAAGT CCCGGAAACT CGCTGCCTGA
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Protein sequence | MLGRKVPAVT FRTRVRDESV GGSNPFRWQD VTSDDYFAGK RVVLFSLPGA FTPTCSTYQL PDFEKLNSEF RALGIEEIYC VSVNDAFVMN AWGKSQGLEN VKLIPDGSGE FTRKMGMLVA KDNLGFGMRS WRYAAIVNNG VVEQWFEEEG YSDNCDSDPY GVSSPQNILA ALKSRKLAA
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