Gene Smed_2377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2377 
Symbol 
ID5323238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2457520 
End bp2458131 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content58% 
IMG OID640791315 
Producturease accessory protein UreG 
Protein accessionYP_001328044 
Protein GI150397577 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 
TIGRFAM ID[TIGR00073] hydrogenase accessory protein HypB
[TIGR00101] urease accessory protein UreG 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.168299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCTA AAAACGGTCC GCTTCGCGTT GGTATCGGTG GTCCGGTCGG CTCCGGTAAG 
ACGGCGCTGA CCGAAAAGCT CTGCAAGGCG ATGCGGGAGA GATATTCCCT CGCGGTCGTC
ACAAACGACA TCTACACGAA AGAGGACGCA GAGGCGCTCG TCCGGATGCA GGCTTTGCCT
TCGGAACGAA TCGTCGGCGT CGAGACCGGT GGATGCCCCC ATACGGCCAT TCGCGAGGAC
GCATCGATCA ATCTTCAGGC AATTGCGGAT CTGAACCGCC GGCTTCCCGA GCTGGACCTC
GTCTTCATAG AATCCGGCGG CGATAATCTC GCGGCGACCT TCTCGCCCGA TCTCGCCGAT
CTGACGATTT ATGTGATCTC GGTTTGTCAG GGCGAGGAAA TTCCGCGCAA GGGCGGACCG
GGAATCACCA AGTCGGATCT ATTGGTGATC AACAAAAAGG ATCTCGCCCC CCATGTCGGC
GCAGACCTCG AGATCATGGA AAGGGATGCG GCGCGGATGC GCGGCGAGAA GCCCTTCGTG
TTTTCCGACA TGAAACGGGG CGATGGGGTG GAGCGGATCG TCGATTTCCT GATACTGCAT
GGTGGTCTCT AA
 
Protein sequence
MPSKNGPLRV GIGGPVGSGK TALTEKLCKA MRERYSLAVV TNDIYTKEDA EALVRMQALP 
SERIVGVETG GCPHTAIRED ASINLQAIAD LNRRLPELDL VFIESGGDNL AATFSPDLAD
LTIYVISVCQ GEEIPRKGGP GITKSDLLVI NKKDLAPHVG ADLEIMERDA ARMRGEKPFV
FSDMKRGDGV ERIVDFLILH GGL