| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2369 |
|---|
| Symbol | |
|---|
| ID | 5323230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 2447542 |
|---|
| End bp | 2448333 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640791307 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001328036 |
|---|
| Protein GI | 150397569 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0194302 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.406873 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCCA ATTCCGCCTC CGTGGTCTCG GCCCGGAACC TCGGCCTGAC ATTCGAGACC
AGTGACGGTC CGGTCAATGC TCTGACCGGC GTCGACCTCG ACGTGGCCAA GGGCGACTTC
GTCTCCTTCA TCGGCCCGTC CGGCTGCGGC AAGACGACGT TTCTGCGCGT CATCGCCGAT
CTGGAAAAGC CGACCGCCGG CAGCATAACG GTCAACGGCA TGACGCCGGA GGAAGCGCGC
CGGAGGCGCG CCTATGGCTA TGTCTTTCAG GCGGCCGCTC TTTATCCGTG GCGGACCATC
GAAAACAACA TCGCACTACC CCTTGAGATC ATGGGCTATT CGAGAGAGGA CCGAAAAGCA
CGGATCGAGC GGACGCTCGA GCTCGTCAAT CTCTCAGGCT TCGGGAAGAA ATATCCCTGG
CAGCTTTCCG GCGGTATGCA GCAGCGCGCG TCGATCGCCC GGGCACTCGC CTTCGATGCC
GATCTCCTGC TGATGGACGA GCCTTTCGGG GCGCTTGACG AAATCGTCCG CGACCACCTG
AACGAACAGC TCCTGAAGCT TTGGGCGCGT ACCAACAAGA CCATCTGTTT CGTCACGCAC
TCCATTCCCG AGGCGGTCTA CCTCTCGACC AGGATCATCG TCATGAGCCC CCGCCCGGGA
CGCGTCACTG ACGTGATCGA ATCGACGCTT CCGAGGGAAC GCCCACTCGG CATCCGCGAA
ACGCCGGAGT TCCTGGAAAT CGCGCATCGG GTTCGCGAAG GCTTGAGAGC GGGGCACAGC
TATGAGGAAT AG
|
|---|
| Protein sequence | MTSNSASVVS ARNLGLTFET SDGPVNALTG VDLDVAKGDF VSFIGPSGCG KTTFLRVIAD
LEKPTAGSIT VNGMTPEEAR RRRAYGYVFQ AAALYPWRTI ENNIALPLEI MGYSREDRKA
RIERTLELVN LSGFGKKYPW QLSGGMQQRA SIARALAFDA DLLLMDEPFG ALDEIVRDHL
NEQLLKLWAR TNKTICFVTH SIPEAVYLST RIIVMSPRPG RVTDVIESTL PRERPLGIRE
TPEFLEIAHR VREGLRAGHS YEE
|
|---|
| |