Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2366 |
Symbol | |
ID | 5323227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2444076 |
End bp | 2445326 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640791304 |
Product | allantoate amidohydrolase |
Protein accession | YP_001328033 |
Protein GI | 150397566 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.291014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.850534 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCAC CTGGCGAGAA TAGGCGCGTC AATGCCGATC GCCTGTGGGA TTCGTTGATG GAAATGGCGA AGATCGGCCC CGGCGTTGCC GGCGGCAATA ACCGCCAGAC CTTGACGGAT GCGGACGGTG AAGGCCGCCG GCTTTTCCAG TCCTGGTGCG AAAAGGCGGG GCTCTCCATG GGTGTCGACA AGATGGGCAC CATGTACATG ACCCGCCCGG GTACCGATTC GGATGCGCTG CCCGTCCATA TCGGCTCTCA CCTCGACACG CAGCCGACGG GCGGCAAGTT CGACGGTGTG CTCGGCGTTC TGAGCGGTCT CGAAGTCGTA CGCACGATGG ACGACCTCGG GATCAGGACG AAGCACCCGG TCGTCGTGAC CAACTGGACC AACGAGGAAG GCGCCCGCTT CGCGCCTGCC ATGCTCGCCT CCGGCGTCTT TGCCGGCGTC CACACGCTTG ATTACGCCTA TGCCCGAAAG GACCCGGAAG GGAAGAGCTT CGGCGACGAA TTGAAGCGCA TCGGCTGGTC CGGCGACGAA GAGGTGGGCG CGCGCAAGAT GCACGCCTAT TTCGAATACC ACATCGAACA AGGCCCGATT CTCGAGGCCG AGAACAGGCA GATCGGCGTC GTCACACACT GCCAGGGCCT CTGGTGGCTG GAGTTCACGC TGACGGGCAA GGAGGCGCAT ACGGGCTCGA CGCCGATGGA GATGCGCGTC AATGCGGGCC TTGCCATGGC GCGCATTCTC GAAATGGTTC AGACCGTCGC GATGGAAAAC CAGCCGGGCG CTGTCGGCGG TGTCGGCCAG ATGTTCTTTT CGCCAAATTC CCGCAACGTG CTGCCCGGCA AAGTGGTGTT CACGGTCGAT ATCCGCTCGC CCGACCAGAC CAAGCTCGAC CGCATGCGGG CCCGGATCGA AGCCGAAGCG CCCAAAATCT GCGAGCGGCT CGGGGTTGGC TGTTCGATCG AGGCGGTCGG GCACTTCGAT CCCGTCACCT TCGATCCGAA GCTGGTCGAA ACCGTGCGCG GCGCCGCCGA GAAGCTCGGC TACAGCCACA TGAACCTCGT CTCGGGCGCG GGCCACGATG CCTGCTGGGC CGCGAAGGTC GCGCCGACCA CCATGATCAT GTGCCCCTGC GTCGATGGGC TCAGTCATAA CGAGGCGGAG GACATCTCCA AGGATTGGGC GGCCGCCGGC GCGGACGTCC TCTTTCATGC CGTCCTCGAG ACGGCGGAAG TCGTGGAATG A
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Protein sequence | MAAPGENRRV NADRLWDSLM EMAKIGPGVA GGNNRQTLTD ADGEGRRLFQ SWCEKAGLSM GVDKMGTMYM TRPGTDSDAL PVHIGSHLDT QPTGGKFDGV LGVLSGLEVV RTMDDLGIRT KHPVVVTNWT NEEGARFAPA MLASGVFAGV HTLDYAYARK DPEGKSFGDE LKRIGWSGDE EVGARKMHAY FEYHIEQGPI LEAENRQIGV VTHCQGLWWL EFTLTGKEAH TGSTPMEMRV NAGLAMARIL EMVQTVAMEN QPGAVGGVGQ MFFSPNSRNV LPGKVVFTVD IRSPDQTKLD RMRARIEAEA PKICERLGVG CSIEAVGHFD PVTFDPKLVE TVRGAAEKLG YSHMNLVSGA GHDACWAAKV APTTMIMCPC VDGLSHNEAE DISKDWAAAG ADVLFHAVLE TAEVVE
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