Gene Smed_2362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2362 
Symbol 
ID5323223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2439122 
End bp2440225 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content61% 
IMG OID640791300 
Productalcohol dehydrogenase 
Protein accessionYP_001328029 
Protein GI150397562 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGGAA ATCATACCGC AACTGGAGAG GCAAATTCAA CACTATGCTC GCCCGACCGA 
AACAGATGGA AAGGAACGAG CATGTCGAAA TGGATGCAGG AATGGAGCAC GGCGGCGGTG
GGTCCGCACG ATCTCAAGCT TGCTGAACGG CCGCTGCCGG AGGTCGGCGA GCACGATGTC
CTCGTGCGGA CGCTCGCCGT GTCGCTCAAC TATCGCGACA AGCTGGTACT CGAGACCGGC
ATGGGGCTTG ATCTCGCTTT TCCCTTCGTG CCGGCCTCCG ACATGAGCGG AGTGGTCGAA
GCGGTCGGCA AGAGCGTCAC GCGTTTCCAG CCAGGCGATC GCGTGATCTC TACCTTCTCT
CCCGGTTGGA TCGATGGTTT AAGGCCGGGC AACGGCAGGA CGCCTGCCTA TGCGACGCTT
GGCGGCGCTT TTCCCGGCGT CATGTCGGAA TATGTTGCCT TTCCGGAAGA CTGGTTCGTG
GCGGCTCCCA AAAGCCTTGA TGCCGCGGAG GCGAGCACCC TGCCATGCGC CGGGCTTACC
GCCTGGTTTG CTCTTGTCGA AAGAGGGCAC TTGAGAGCCG GAGACCGTGT CCTGGTGCAG
GGGACAGGCG GAGTTGCGCT TTTCGGCCTG CAGATCGCCA AGGCAACCGG TGCCGAAGTC
ATCATCACCT CGAGCAGCGC GGAAAAGCTC GAACGGGCAC TGTCCCTTGG AGCCGATCAC
GGCATCAACC GTTCAAGCGA GGATTGGGTG GAGCGCCTAT ATCAGCTCAC CGCGGACCAT
GGCGCGGATC ACATTTTGGA GATCGCCGGC GGTGCAGGGC TCGGTCAGTC GCTGAGGGCT
GTCGCGCCGG ACGGGCGCAT TTCGGTGATC GGCGTGCTCG AAGGCTTCGA GGTTTCCGGC
CCTGTTGGGC CATTGCTTCT GAAGTCGCCG GTCGTGCAGG GCATCAGCGT CGGCCATCGC
AGGGCACTCG AAGATCTGGT GGGCGCTGTC GAACGCTTGC GGCTGAAGCC CGTTATAGAC
AAACGCTACA AATTCGCAGA GTTTCCGGAG GCTCTCGCAC ATCTCGACCA CGGCCCCTTC
GGCAAGGTGG TGATAGAGTT CTGA
 
Protein sequence
MMGNHTATGE ANSTLCSPDR NRWKGTSMSK WMQEWSTAAV GPHDLKLAER PLPEVGEHDV 
LVRTLAVSLN YRDKLVLETG MGLDLAFPFV PASDMSGVVE AVGKSVTRFQ PGDRVISTFS
PGWIDGLRPG NGRTPAYATL GGAFPGVMSE YVAFPEDWFV AAPKSLDAAE ASTLPCAGLT
AWFALVERGH LRAGDRVLVQ GTGGVALFGL QIAKATGAEV IITSSSAEKL ERALSLGADH
GINRSSEDWV ERLYQLTADH GADHILEIAG GAGLGQSLRA VAPDGRISVI GVLEGFEVSG
PVGPLLLKSP VVQGISVGHR RALEDLVGAV ERLRLKPVID KRYKFAEFPE ALAHLDHGPF
GKVVIEF