| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2360 |
|---|
| Symbol | |
|---|
| ID | 5323221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 2436352 |
|---|
| End bp | 2437713 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640791298 |
|---|
| Product | putative oxidoreductase |
|---|
| Protein accession | YP_001328027 |
|---|
| Protein GI | 150397560 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAACGA CTCAATCTGG GATTCTCGGC GGGCGCTTGC CGCTTGCCGA ATACGAAGCC
AATTTTTCCG ACCTTCACGC GCCTCTCGAC AGGCATGAGG CGCTGGTCGC CGCGGATCGC
TGTTACTTCT GTCATGACGC GCCCTGCATG ACGGCCTGTC CCACCGCCAT AGACATCCCC
CTCTTCATCC GGCAGATCGC GACCGGTAAT CCCATCGGCT CGGCCAAGAC GATCTTCGAT
CAGAACATAC TTGGTGGAAT GTGCGCCCGC GTCTGTCCCA CCGAAACGCT CTGCGAAGAA
GCCTGCGTGC GCAACACGGC AGAGGAGCGG CCGGTCGAAA TCGGCCGTCT GCAGCGCTAT
GCTTCCGACA TCGCGATGAC GGAAAACAAA CAGTTCTACA CGCGATCCGC CCGCACCGGC
CGCCGGGTCG CGGTCGTTGG CGCCGGACCC GCGGGGCTCG CCTGCGCGCA CCGGCTGGCC
GTGAAGGGCC ATGACGTGGT GATCTACGAT GCGCGCGAAA AGGCCGGTGG CCTGAACGAA
TACGGCATTG CCGCCTATAA GGCGGTCGAC GATTTCGCCC AGAAGGAAGT CGACTATGTG
CTTTCGATCG GCGGCATCGA GGTCAGTCAC GGCAAAGCGC TCGGCCGCGA CTTCTCTCTT
GCCGACCTGG CAGGCGAATT CGACGCTGTC TTTCTCGGCC TCGGCCTCGC AGGGGTAAAC
GCACTTCGCA TTGAAGGCGA GAACGCCGAA GGCGTAGAGG ATGCCGTCGA TTTCATCGCA
GCACTTCGCC AGTCGAAGAC AAAGGCCGAC ATTCCGGTCG GCCGGCGCGT CGTGGTGCTC
GGCGGCGGCA TGACTGCGAT CGATGCCGCC GTGCAGGCAA AGCTGCTCGG CGCAGAGGAG
GTGACGATCT GCTATCGCCG CGGCAAGGAG CATATGAACG CCTCCGGATT CGAGCAGGAC
CTCGCGGCGT CCAAGGGCGT CACCATCCGT CACTGGCTGC AGCCGAAGCG TATTGCGGTC
AAGGACGGCA GGGTCGCCGG CATCGAACTC GACTACACCA CGCTCGATAA CGGGAAGCTG
ACGACGACCG GGGAGACCGG CATCCTCGCC GCCGATCAGA TCTTCAAGGC CATCGGTCAG
ACCTTCGAGG CCTCCGCCCT CGGCGCGCTT CGGATGAAAA GCGGCCGCAT CGTCGTCGAT
GCCGAAGGAC GCACGTCGCT GGAGAAGGTC TGGGCCGGCG GCGACTGCGT GCTCGGCGGC
GAGGATCTCA CCGTTTCCGC CGTTGCGATG GGACGCGATG CGGCCGGATC GATCGACCGG
GCTTTCGCCG CGGCTCAACC GCTGGCGAGT GCCGTTGCCT GA
|
|---|
| Protein sequence | MGTTQSGILG GRLPLAEYEA NFSDLHAPLD RHEALVAADR CYFCHDAPCM TACPTAIDIP
LFIRQIATGN PIGSAKTIFD QNILGGMCAR VCPTETLCEE ACVRNTAEER PVEIGRLQRY
ASDIAMTENK QFYTRSARTG RRVAVVGAGP AGLACAHRLA VKGHDVVIYD AREKAGGLNE
YGIAAYKAVD DFAQKEVDYV LSIGGIEVSH GKALGRDFSL ADLAGEFDAV FLGLGLAGVN
ALRIEGENAE GVEDAVDFIA ALRQSKTKAD IPVGRRVVVL GGGMTAIDAA VQAKLLGAEE
VTICYRRGKE HMNASGFEQD LAASKGVTIR HWLQPKRIAV KDGRVAGIEL DYTTLDNGKL
TTTGETGILA ADQIFKAIGQ TFEASALGAL RMKSGRIVVD AEGRTSLEKV WAGGDCVLGG
EDLTVSAVAM GRDAAGSIDR AFAAAQPLAS AVA
|
|---|
| |