| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2347 |
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| Symbol | |
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| ID | 5323208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2422944 |
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| End bp | 2423738 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640791285 |
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| Product | two-component response regulator |
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| Protein accession | YP_001328014 |
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| Protein GI | 150397547 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.177509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACATTGT CCACCCGAAT CGCTCCATTT CTTCCTTACC TACGCCGCTA TTCCCGCGCG
CTGACCGGCT CTCAGACCTC CGGAGACGCC TATGTCGCGG CCGTGCTCGA GGCGCTCATC
GCCGATACCT CAATCTTTCC GGAAGCAAGC AGCGACAGGG TAGCCTTGTT CCGTCTCTTC
ACATCCATGT TCGGCTCGTC GTCCATCATG GTGCCGGAGC CGGTGTCGCC CTTTGCCTGG
GAGCAGCGTG CGTCGGTCAA CCTCGCCGCC GTCTCGCCTC TCGCCCGTCA GGCCTTCCTG
CTTGTATCGG TCGAGGGATT TACCCCACAG GAAGCCGCCG AGGTCCTCGA CGTAGATGCC
GCGAAACTTG CTTCCCTTCT CGACCGAGCT TCCCAGGAAA TTTCGCGCCA GGTCGCCACC
GATATCATGA TCATCGAAGA CGAACCGCTG ATCGCGATCG ACATCGAGCA AATGGTCGAA
AGCCTCGGCC ACACTGTGAC GGGGATCGCC CGAACAAAAG ACGAAGCCGT TGCCCTCTAC
GAGGCGACCA AGCCGAACAT GGTACTCGCG GACATCCAAC TCGCCGACGG CAGCTCGGGA
ATCGACGCGG TCAACGAAAT CCTGCAAACG GCGGCCGTTC CGGTAATTTT CATCACCGCA
TTCCCCGAGC GTCTGCTGAC GGGTGAACGT CCCGAGCCCA CATTCCTCGT CACCAAGCCA
TTCAATCCGG AAATGGTGAA GGCGCTGATC AGTCAGGCAT TGTTCTTCAA CGAAACGACC
AAGGCTGCGG CCTGA
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| Protein sequence | MTLSTRIAPF LPYLRRYSRA LTGSQTSGDA YVAAVLEALI ADTSIFPEAS SDRVALFRLF
TSMFGSSSIM VPEPVSPFAW EQRASVNLAA VSPLARQAFL LVSVEGFTPQ EAAEVLDVDA
AKLASLLDRA SQEISRQVAT DIMIIEDEPL IAIDIEQMVE SLGHTVTGIA RTKDEAVALY
EATKPNMVLA DIQLADGSSG IDAVNEILQT AAVPVIFITA FPERLLTGER PEPTFLVTKP
FNPEMVKALI SQALFFNETT KAAA
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