| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2345 |
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| Symbol | |
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| ID | 5323206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2422053 |
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| End bp | 2422607 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640791283 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001328012 |
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| Protein GI | 150397545 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0608175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCCG AAAATCAAGA GTTCAAGCGT GAGATGCTTG CCGCGCTGCC GAGCCTGCGC
GCCTTCGCAA TGTCGCTGAT CGGACGGCAC GACCGCGCCG ATGACCTCGT GCAGGACACG
ATTATGAAGG CCTGGGCGAA GCAGGACCAT TTTCAGATCG GCACCAATAT GAAGGCGTGG
CTATTCACGA TCCTGCGCAA CGAGCTTTAC AGCCAGATGC GCAAGCGTGG GCGTGAGGTG
CAGGACAGCG ACGGTCATTT GACGGAAACG CTTGCCCATC ACCCGGAGCA GTACGGCTCG
CTCGATCTGC AGGATTTCCG CCGCGCGCTC GACCAGTTGC CGCCTGACCA GCGCGAAGCG
ATCATTCTTG TAGGGGCCTC GGGCTTTTCC TATGAGGAGG CGGCCACGAT CTGCGGCTGT
GCTCTTGGAA CGATCAAGAG CCGCGTCAAC CGGGCGCGCC AGCGGCTGCA GGAAATTCTC
CAGGTCAGAG GAGAAAACGA TTATGGGCCG GACGAGACTT CAGCACCCAT TACTTCGCGC
GCCTTCGTTT CCTGA
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| Protein sequence | MSSENQEFKR EMLAALPSLR AFAMSLIGRH DRADDLVQDT IMKAWAKQDH FQIGTNMKAW
LFTILRNELY SQMRKRGREV QDSDGHLTET LAHHPEQYGS LDLQDFRRAL DQLPPDQREA
IILVGASGFS YEEAATICGC ALGTIKSRVN RARQRLQEIL QVRGENDYGP DETSAPITSR
AFVS
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