Gene Smed_2340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2340 
Symbol 
ID5323201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2417275 
End bp2418390 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content67% 
IMG OID640791278 
Producttransport system permease protein 
Protein accessionYP_001328007 
Protein GI150397540 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAACG GGGTCATGGA AAGTCCGATG CGCAAGCCCG CTTTCGCAGC TCGCGTCGTC 
CGCGACTGGC GCAGCGGGGA CCGGGCAGGC CTGGCGCGCT GCCTGATCGT CGTCCTGACT
CTGCTTGCGG TGGCGACGTT CATGACCTCC ATCACCACCG GCGCAGCGGA CGCCTCGCTT
GCCAATATCC TTCGATGGCT CACCGGCGAG GCCGATCAGG CGATGAGCGC ACGCGACCGC
ATCATCATCC TCGATATCCG CCTGCCCCGC GCCGTGCTCG GGATGCTCGT CGGCGCATCG
CTCGCAGTGT CGGGCGTGGT AATGCAGGGC CTCTTCCGCA ATCCGCTGGC CGATCCCGGC
CTCGTCGGCG TCTCCTCCGG CGCAAGCCTC GGCGCGGTGC TGCTGATCGT GCTCGGCGAC
GTCGCCTTCG GCCCGCTGTT CGCGGTTCTG GGCTTCTATG CCCTCCCCTT CGGCGCCTTT
CTGGGCGGGC TTGCCACGAC GCTGCTGCTT TACCGGATCG CGACCCGCGG CGGCCAGACA
TCGGTCGCAA CGATGCTGCT TGCCGGCATC GCCCTCGGTG CGCTTGCCGG CGCGGTCACC
GGGGTGCTCG TCTTCATCGC CGACGACAAA CAATTGCGCG ATCTCACCTT CTGGGGTCTT
GGATCGCTGG CGGGCGCCAA TTGGACCAAG ATCGCCGCCG CCGGACCGAT CATCCTCGTG
TCGCTGGCAG TCGTCCCGTT CCTGGCACGC GGCCTAAACG CCATCACCCT CGGCGAAGCC
GCGGCGTACC ACATGGGCAT CCCGGTGCAG CGCCTGAAAA ACATCGCCGT CTTCAGCGTC
GCCGGAGCGA CCGGCGCCTC GGTTGCGGTC AGCGGCGGCA TCGGCTTCGT CGGCATCGTC
GTTCCGCATC TCCTGCGGCT GGTGATCGGC CCGGATCATC GCTACCTGCT GCCGGCATCC
GCCCTCCTTG GAGGCACGTT GCTGATCTTC GCCGACATGC TCGCCCGCAC CATCGTGTCG
CCGGCGGAAC TGCCGATCGG CATCATCACC GCCTTCGTCG GAGCGCCGTT CTTCCTATGG
GTCCTGCTGC GGGGCCGATC GAATATAGGA CTTTGA
 
Protein sequence
MGNGVMESPM RKPAFAARVV RDWRSGDRAG LARCLIVVLT LLAVATFMTS ITTGAADASL 
ANILRWLTGE ADQAMSARDR IIILDIRLPR AVLGMLVGAS LAVSGVVMQG LFRNPLADPG
LVGVSSGASL GAVLLIVLGD VAFGPLFAVL GFYALPFGAF LGGLATTLLL YRIATRGGQT
SVATMLLAGI ALGALAGAVT GVLVFIADDK QLRDLTFWGL GSLAGANWTK IAAAGPIILV
SLAVVPFLAR GLNAITLGEA AAYHMGIPVQ RLKNIAVFSV AGATGASVAV SGGIGFVGIV
VPHLLRLVIG PDHRYLLPAS ALLGGTLLIF ADMLARTIVS PAELPIGIIT AFVGAPFFLW
VLLRGRSNIG L