Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2340 |
Symbol | |
ID | 5323201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2417275 |
End bp | 2418390 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640791278 |
Product | transport system permease protein |
Protein accession | YP_001328007 |
Protein GI | 150397540 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAACG GGGTCATGGA AAGTCCGATG CGCAAGCCCG CTTTCGCAGC TCGCGTCGTC CGCGACTGGC GCAGCGGGGA CCGGGCAGGC CTGGCGCGCT GCCTGATCGT CGTCCTGACT CTGCTTGCGG TGGCGACGTT CATGACCTCC ATCACCACCG GCGCAGCGGA CGCCTCGCTT GCCAATATCC TTCGATGGCT CACCGGCGAG GCCGATCAGG CGATGAGCGC ACGCGACCGC ATCATCATCC TCGATATCCG CCTGCCCCGC GCCGTGCTCG GGATGCTCGT CGGCGCATCG CTCGCAGTGT CGGGCGTGGT AATGCAGGGC CTCTTCCGCA ATCCGCTGGC CGATCCCGGC CTCGTCGGCG TCTCCTCCGG CGCAAGCCTC GGCGCGGTGC TGCTGATCGT GCTCGGCGAC GTCGCCTTCG GCCCGCTGTT CGCGGTTCTG GGCTTCTATG CCCTCCCCTT CGGCGCCTTT CTGGGCGGGC TTGCCACGAC GCTGCTGCTT TACCGGATCG CGACCCGCGG CGGCCAGACA TCGGTCGCAA CGATGCTGCT TGCCGGCATC GCCCTCGGTG CGCTTGCCGG CGCGGTCACC GGGGTGCTCG TCTTCATCGC CGACGACAAA CAATTGCGCG ATCTCACCTT CTGGGGTCTT GGATCGCTGG CGGGCGCCAA TTGGACCAAG ATCGCCGCCG CCGGACCGAT CATCCTCGTG TCGCTGGCAG TCGTCCCGTT CCTGGCACGC GGCCTAAACG CCATCACCCT CGGCGAAGCC GCGGCGTACC ACATGGGCAT CCCGGTGCAG CGCCTGAAAA ACATCGCCGT CTTCAGCGTC GCCGGAGCGA CCGGCGCCTC GGTTGCGGTC AGCGGCGGCA TCGGCTTCGT CGGCATCGTC GTTCCGCATC TCCTGCGGCT GGTGATCGGC CCGGATCATC GCTACCTGCT GCCGGCATCC GCCCTCCTTG GAGGCACGTT GCTGATCTTC GCCGACATGC TCGCCCGCAC CATCGTGTCG CCGGCGGAAC TGCCGATCGG CATCATCACC GCCTTCGTCG GAGCGCCGTT CTTCCTATGG GTCCTGCTGC GGGGCCGATC GAATATAGGA CTTTGA
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Protein sequence | MGNGVMESPM RKPAFAARVV RDWRSGDRAG LARCLIVVLT LLAVATFMTS ITTGAADASL ANILRWLTGE ADQAMSARDR IIILDIRLPR AVLGMLVGAS LAVSGVVMQG LFRNPLADPG LVGVSSGASL GAVLLIVLGD VAFGPLFAVL GFYALPFGAF LGGLATTLLL YRIATRGGQT SVATMLLAGI ALGALAGAVT GVLVFIADDK QLRDLTFWGL GSLAGANWTK IAAAGPIILV SLAVVPFLAR GLNAITLGEA AAYHMGIPVQ RLKNIAVFSV AGATGASVAV SGGIGFVGIV VPHLLRLVIG PDHRYLLPAS ALLGGTLLIF ADMLARTIVS PAELPIGIIT AFVGAPFFLW VLLRGRSNIG L
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