Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2335 |
Symbol | |
ID | 5323196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2413322 |
End bp | 2414248 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640791273 |
Product | TonB family protein |
Protein accession | YP_001328002 |
Protein GI | 150397535 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCACA TGGTGAAATG GGCAGCCGCG ATCGGCCTTT CCCTGCTGGC GCATGCCGGC GGGGCGATGT TCCTTGCGCC CGAGAACGAG AAGGAGGAAG TGCTCGTCGC GGGCGGTTCG TCCGTCGAAG TGTCGCTGCT CGGGAATGCC TTCGAAGACA CGGTTCAGGC AGGTGATCCC TCCGACGTGG TGGAGCCGAC TGAAGAGACG CCCGAGGAAC TTACGCCGAC CGAGGCCGAG GCGACGGAAG AGGTGGTCGA AGCCGTGGAG CCTGCGCCGA CCGAAGCTGT CTCGGCACAG CCGTCCGAGA TGACGCCGAC GGAAGCGGAC GTGATCCTTC CAGCCGAAGA AGTACCGGTG ACCAAGGCCG ATGACGCTGC GGTGATCGCC AGCGTGGCTC CGGTCGAGAC CGTCATTCCG GAAGAGAAAC CCGAACTGCC AAAAGTCGTA CAGCCGGAGG TCGAGAAGCC GGAACCAAAG AAGGAGCCGG TAAAGAAAAA GAAGGTCGCG CGAAAAAAGG CGGGAGATGG CGGCAAGCAG GCGAAAACGC AGAACAAGGG CAAAAGCGAT GGTGTAGAAA ATGCCAGGGC GGCGGCTGCC AGCGGAGAAA AACGGGGTGG GTCGCAGGAA ATCGGCAATG CCGCCGTGTC GAATTATCCC GGCAAGGTAC GAAGGAAGCT CACCCGCGCC ATACGCTATC CCTCGGCCGC CAAGCGACAG GGACTGCGCG GCGTCGCTCA TGTCAGTTTT ACTGTAACTT CCGGTGGTGG GGTGGCAAGT GTCGGGATCA CGAAGAGCGC TGGTTCGCCC GTCCTCGATC AGGCGGCGTT GGAAACAGTA CGTCGAGCTG CACCATTCCC AGCCATCCCA GCCGGTGCGG GCCGCGACAG ATGGGAGTTC AACATTCCGG TGGCATTCAC TCGGTGA
|
Protein sequence | MKHMVKWAAA IGLSLLAHAG GAMFLAPENE KEEVLVAGGS SVEVSLLGNA FEDTVQAGDP SDVVEPTEET PEELTPTEAE ATEEVVEAVE PAPTEAVSAQ PSEMTPTEAD VILPAEEVPV TKADDAAVIA SVAPVETVIP EEKPELPKVV QPEVEKPEPK KEPVKKKKVA RKKAGDGGKQ AKTQNKGKSD GVENARAAAA SGEKRGGSQE IGNAAVSNYP GKVRRKLTRA IRYPSAAKRQ GLRGVAHVSF TVTSGGGVAS VGITKSAGSP VLDQAALETV RRAAPFPAIP AGAGRDRWEF NIPVAFTR
|
| |