| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2326 |
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| Symbol | |
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| ID | 5323187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2407024 |
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| End bp | 2408664 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640791264 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001327993 |
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| Protein GI | 150397526 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.294702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCACA AGCTCAATGG ACGTTTTCGA ATTCTCGCCG CCTCGGCGGC CCTCGCCATG
GCGATGGGCG CGGCTCAGCC GGCCTTCGCG GAAACGCCGA AGGACACGCT GGTCGAGGGT
TTCGCATTCG ACGACATCAT CACCATGGAT CCCGGCGAAG CCTTCGAGCT TTCGACCGCC
GAGATGACGA GCAATACCTA CAGCCTGCTC GTGAGGCTCG ATCTCAACGA TACCTCCAAG
GTCGTAGGCG ATCTTGCGGA AAGCTGGACG GTCTCGGATG ACGGCCTGAC CTATACGTTC
AAGCTCAAGC CGGGAATGAA ATTCGCATCC GGCAATCCGA TCACCGCCGA GGACGTCGCC
TATTCGTTCG AACGTGCCGT CAAGCTCGAC AAGAGCCCGG CCTTCATCCT CACCCAGTTC
GGCCTTACCG GGGACAATGT CACGGAAAAG GCGAAGGCCG CCGACCCGGA GACCTTTGTT
TTCACGGTCG ACCAGCCCTA CGCGCCGAGT TTCGTCTTGA ACTGTCTGAC CGCGACGGTT
GCTTCCGTAG TCGACAAGAA GCTCGTGCTC GAACATGTGA AATCCGTGTC GCCGAGCGAC
GAGTACAAGT ATGACAACGA CTTCGGCAAT GAGTGGCTGA AGACCGGTTA TGCCGGTTCC
GGTCCGTTCA AGCTGCGCGA GTGGCGCGCC AATGAAGTCG TGGTGCTGGA ACGCAACGAC
AATTATTATG GCGAACCGGC GAAACTCGCC CGCGTCATCT ACCGTCACAT GAAGGAAAGC
TCGGGTCAGC GGCTCGCGCT TGAAGCCGGC GACATCGATG TCGCGCGCAA CCTCGAGCCC
GGCGACTACG ACGCAGTCGG CAAGAATGCC GATCTGGCGA CGGCCAGCGC CCCGAAGGGA
ACGGTCTACT ATATCAGCCT CAATCAGAAG AACGAAAAGC TCGCAAAACC CGAGGTACAG
CAGGCGTTCA AGTATCTTGT CGATTACGAC GCGATTGGCT CGACCCTGAT CAAGGGCATC
GGCGAGATTC ACCAGAGCTT CCTGCCGAAG GGTGTGCTGG GTGCCGTCGA CGAGAACCCC
TACACCTTCG ACGTAGCCAA GGCGAAGGAA CTGCTGGCGA AGGCCGGCTA TCCGGACGGC
TTCACCGTTA CGATGGATGT GCGTAATACC CAGCCGGTCA CCGGCATTGC CGAATCCTTC
CAGCAGACGC TGGGGCAGGC GGGCGTGAAG CTCGAAATTA TTCCAGGAGA CGGCAAGCAG
ACCCTGACCA AGTACCGCGC CCGCAATCAC GACATGTATA TCGGCCAGTG GGGCATGGAT
TATTTCGATC CGCACTCCAA TGCCGATACC TTCACCAACA ATCCGGACAA TTCCGACGAA
GGCACGAACA AGACGCTCGC CTGGCGCAAC GCCTGGGACG TTCCGGAACT CAGCAAGAAG
ACCAAGGACG CGCTCCTCGA ACGCGACAGC ACAAAGCGCG CCGAGATCTA CAAGGAGCTG
CAGAAAACGG TGCTCGAGGA CAGTCCTTTC GTCGTCATCT TCCAGCAGAC AGAGGTCGCC
GGGTTGCGCG GCATTGTCGA GGGCTTCAAG CTCGGGCCGA GCTTCGACAC CAACTACGTC
TGGAACGTCT CCAAGGAATA G
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| Protein sequence | MMHKLNGRFR ILAASAALAM AMGAAQPAFA ETPKDTLVEG FAFDDIITMD PGEAFELSTA
EMTSNTYSLL VRLDLNDTSK VVGDLAESWT VSDDGLTYTF KLKPGMKFAS GNPITAEDVA
YSFERAVKLD KSPAFILTQF GLTGDNVTEK AKAADPETFV FTVDQPYAPS FVLNCLTATV
ASVVDKKLVL EHVKSVSPSD EYKYDNDFGN EWLKTGYAGS GPFKLREWRA NEVVVLERND
NYYGEPAKLA RVIYRHMKES SGQRLALEAG DIDVARNLEP GDYDAVGKNA DLATASAPKG
TVYYISLNQK NEKLAKPEVQ QAFKYLVDYD AIGSTLIKGI GEIHQSFLPK GVLGAVDENP
YTFDVAKAKE LLAKAGYPDG FTVTMDVRNT QPVTGIAESF QQTLGQAGVK LEIIPGDGKQ
TLTKYRARNH DMYIGQWGMD YFDPHSNADT FTNNPDNSDE GTNKTLAWRN AWDVPELSKK
TKDALLERDS TKRAEIYKEL QKTVLEDSPF VVIFQQTEVA GLRGIVEGFK LGPSFDTNYV
WNVSKE
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