Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2321 |
Symbol | |
ID | 5323182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2402407 |
End bp | 2403339 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640791259 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_001327988 |
Protein GI | 150397521 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.96044 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGGA AGATGCTTTC GATTGGCGAG TGCATGGTGG AGCTCATGCA GGCGGAAGGC GGCATGCTGC GGAAAGGCTA TGCAGGCGAT AGCTTCAATA CAGCCTATTA CGCGCGCCTC TTCCTGCCGG CGGACTGGAC GGTCGATTAT TTTACGGCCG TCGGAACCGA TATCGTGTCG CAGGAACTCC TGACCTTCAT CGAAAGCACC GGCGTGGGCA CCTCTCACAT CCGAAAGATC GAAGGGCGGA TGCCCGGTCT TTACATGATC CATCTCAAGG ACGGCGAGCG CAGCTTCTCC TATTGGCGCT CGGCCTCGGC GGCGAAATTG CTCGCCGACG ACCCCGACCG GCTCCGGGCG GCAATCGAGG CGGTGAACGT CGTATTTTTC TCCGGGATTA CGCTGGCGAT CCTCTCGCCC CTAGCAGCAG AGACATTGCT GGCCGAGCTT CGGCGGGCAA AGGCTGGCGG CAGGAACGTG GTCTTCGACC CGAACATCCG CCCGCGCCTT TGGGACGACG CCGCTCGGAT GCGCGCGACG ATCGAAGCCG GTGCGCGGTC CGCAACCATG GTTATGCCCA GCTATGACGA CGAGGCGACG CATTTCGGCG ACGCATCCGT CGAAGCGACG ATCGAACGCT ATCGGTCACT GGGCGCCGAA AACGTCGTTG TCAAAGACGG AGCGAACCGC GTGGCGCTGA GCTTCGCCGG AGATGAGCGC GTTCATGTTC CCGCCTCGCA GGTTTCCGCC GTCGTCGACA CGACAAGCGC CGGCGACAGC TTCAACGGCT CCTTCCTCGC CCGTCTTGCC AGCGGCGACA GTCCGGCGGC CGCCGCGGCG TTCGCCGCCC GAGTCGCCGC GGCGGTGATC GGGCATCATG GGGCGCTGAT CGGACGGGAC AAGCTGCCGG CGGGTAGCGC GCAATTCGCG TGA
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Protein sequence | MAGKMLSIGE CMVELMQAEG GMLRKGYAGD SFNTAYYARL FLPADWTVDY FTAVGTDIVS QELLTFIEST GVGTSHIRKI EGRMPGLYMI HLKDGERSFS YWRSASAAKL LADDPDRLRA AIEAVNVVFF SGITLAILSP LAAETLLAEL RRAKAGGRNV VFDPNIRPRL WDDAARMRAT IEAGARSATM VMPSYDDEAT HFGDASVEAT IERYRSLGAE NVVVKDGANR VALSFAGDER VHVPASQVSA VVDTTSAGDS FNGSFLARLA SGDSPAAAAA FAARVAAAVI GHHGALIGRD KLPAGSAQFA
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