Gene Smed_2321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2321 
Symbol 
ID5323182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2402407 
End bp2403339 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content64% 
IMG OID640791259 
Productribokinase-like domain-containing protein 
Protein accessionYP_001327988 
Protein GI150397521 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.96044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGGA AGATGCTTTC GATTGGCGAG TGCATGGTGG AGCTCATGCA GGCGGAAGGC 
GGCATGCTGC GGAAAGGCTA TGCAGGCGAT AGCTTCAATA CAGCCTATTA CGCGCGCCTC
TTCCTGCCGG CGGACTGGAC GGTCGATTAT TTTACGGCCG TCGGAACCGA TATCGTGTCG
CAGGAACTCC TGACCTTCAT CGAAAGCACC GGCGTGGGCA CCTCTCACAT CCGAAAGATC
GAAGGGCGGA TGCCCGGTCT TTACATGATC CATCTCAAGG ACGGCGAGCG CAGCTTCTCC
TATTGGCGCT CGGCCTCGGC GGCGAAATTG CTCGCCGACG ACCCCGACCG GCTCCGGGCG
GCAATCGAGG CGGTGAACGT CGTATTTTTC TCCGGGATTA CGCTGGCGAT CCTCTCGCCC
CTAGCAGCAG AGACATTGCT GGCCGAGCTT CGGCGGGCAA AGGCTGGCGG CAGGAACGTG
GTCTTCGACC CGAACATCCG CCCGCGCCTT TGGGACGACG CCGCTCGGAT GCGCGCGACG
ATCGAAGCCG GTGCGCGGTC CGCAACCATG GTTATGCCCA GCTATGACGA CGAGGCGACG
CATTTCGGCG ACGCATCCGT CGAAGCGACG ATCGAACGCT ATCGGTCACT GGGCGCCGAA
AACGTCGTTG TCAAAGACGG AGCGAACCGC GTGGCGCTGA GCTTCGCCGG AGATGAGCGC
GTTCATGTTC CCGCCTCGCA GGTTTCCGCC GTCGTCGACA CGACAAGCGC CGGCGACAGC
TTCAACGGCT CCTTCCTCGC CCGTCTTGCC AGCGGCGACA GTCCGGCGGC CGCCGCGGCG
TTCGCCGCCC GAGTCGCCGC GGCGGTGATC GGGCATCATG GGGCGCTGAT CGGACGGGAC
AAGCTGCCGG CGGGTAGCGC GCAATTCGCG TGA
 
Protein sequence
MAGKMLSIGE CMVELMQAEG GMLRKGYAGD SFNTAYYARL FLPADWTVDY FTAVGTDIVS 
QELLTFIEST GVGTSHIRKI EGRMPGLYMI HLKDGERSFS YWRSASAAKL LADDPDRLRA
AIEAVNVVFF SGITLAILSP LAAETLLAEL RRAKAGGRNV VFDPNIRPRL WDDAARMRAT
IEAGARSATM VMPSYDDEAT HFGDASVEAT IERYRSLGAE NVVVKDGANR VALSFAGDER
VHVPASQVSA VVDTTSAGDS FNGSFLARLA SGDSPAAAAA FAARVAAAVI GHHGALIGRD
KLPAGSAQFA