Gene Smed_2312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2312 
Symbol 
ID5323173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2391046 
End bp2392242 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content62% 
IMG OID640791250 
Producthypothetical protein 
Protein accessionYP_001327979 
Protein GI150397512 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.243961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.498174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATG CCGGCCTTTC ACCGTTGCGC GGTCTCGCAA AGCTGCGCGA TGCAAAGACG 
AGACGATTCT CGAGTTATGA CCGGACAGGC GGCAATGACG ACCGGTTGCA TATCGAGCCG
GGCCAGACGG TCACCATCGC TGAATATGCG GGCGCGGGCA TCGTCACCCA TATCTGGGTC
ACGATCCAAT GCGAAAGCGA AAGTTACCTT CGCAAGGCTG TCTTGCGCGC CTGGTGGGAC
GGCGAGGGCG CGCCCAGCAT CGAGGCGCCG ATCGGCGACT TTTTCGGCAT GGGGAATGCG
CGCACAGGAA ACTATGCCAG CTTGCCGATG CAGGCGAGCC CGGAAGACGG CAAGGCCTTC
AATTGCTACT TCCCGATGCC GTTCGGCTCG GGCATGAAAT TCACCATCAC CAATGAAGCC
GAGCACGATC TGCTCTTTTA TTACTATATC GACCTCGAGC TGCATGATGA GCTGGAAGAG
GACCTCGGCC GCTTTCATGC GCAATACCGC CAGGAACGGC CCGAAAACTT CGACGAGGCC
GGGCTGACGA ATGAGCAGGT GCTGTTCGGC GGCGAGAATG TCGACGGCAA GGGCAACTAC
GTCATCCTCG ACGCTGCCGG TCACGGCCAC TATGTCGGCG TGCTCTACAG CGTCTACTCA
CGCCGCCGCT CCGAGGTATG GGACTGGTAC GGCGAGGGCG ACGATATGAT CTACGTTGAC
GGCGAGCCGG GCATTTCGGT CCCGGACGGC ATCCGTAAGC CGGATCCCCG CATCGGTCCG
AAAGCGGCGC TGATCGAAGA TCGGCCGGAA TCCGCGCCCG GAGCCAACGA CGCCTGGCCA
CCGACGCTGC ACGGCACCGG CACGGAAGAC TATTTCAACA CCGCATGGTG TCCGACGCAG
GACTATGACG CCCCCTACCA CGGCATCATC TCCGCCGGCG GTCCGAACTG GACCGAGCCG
GTGACCCTCT ATCGCTGGCA CATCGAGGAC CCGGTGATTT TCCATAAGAA CATCCGGGTG
ACGATCGAGC ATGGTCACGC CAACAGACGC GCCGACGATA TGTCCTCCGT TGCCTTCTGG
TATCAGGCCG AGCCGCACAA GCCGTTCGGC GCTTTCCCCA AGGTCGAGGA CCGGATTCCA
ACCTTTCGCC GCCCCTACCA CAATTGGTCG GCGGTCGAAG CCAGGACGAG GCGCTGA
 
Protein sequence
MNNAGLSPLR GLAKLRDAKT RRFSSYDRTG GNDDRLHIEP GQTVTIAEYA GAGIVTHIWV 
TIQCESESYL RKAVLRAWWD GEGAPSIEAP IGDFFGMGNA RTGNYASLPM QASPEDGKAF
NCYFPMPFGS GMKFTITNEA EHDLLFYYYI DLELHDELEE DLGRFHAQYR QERPENFDEA
GLTNEQVLFG GENVDGKGNY VILDAAGHGH YVGVLYSVYS RRRSEVWDWY GEGDDMIYVD
GEPGISVPDG IRKPDPRIGP KAALIEDRPE SAPGANDAWP PTLHGTGTED YFNTAWCPTQ
DYDAPYHGII SAGGPNWTEP VTLYRWHIED PVIFHKNIRV TIEHGHANRR ADDMSSVAFW
YQAEPHKPFG AFPKVEDRIP TFRRPYHNWS AVEARTRR